Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 460 a.a., putative amino acid transporter from Pseudomonas putida KT2440

 Score = 68.2 bits (165), Expect = 5e-16
 Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 17/342 (4%)

Query: 30  IVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLKFPGDSGLTEVVGHSFGKSYKNLNAYY 89
           +V  + K +   A+++ +    + AY   ++    P    +      +FG     +  + 
Sbjct: 54  LVTQMTKGHLPTAYLLTLAAMLLTAYSYGRMVQAHPYSGSVYTYTRKAFGSHIGFITGWT 113

Query: 90  LLIAMAMAPLVVIMVAGEYLSVLFSN-----YAFGAEFYSAVLMLIGGVILSRN--ISSV 142
           LL+     PL+  ++ G Y+S  F       +  G+      L LIG   ++R   I  V
Sbjct: 114 LLLDYIFLPLLSYLLIGIYMSEYFPTIHAWVWVAGSIALVTFLNLIGIESITRVNWILVV 173

Query: 143 GKISMLISTVISTILVVGGLFTILFYRKDALFTGTGISTIDVGYSFLIMFWSIIGWEILG 202
            ++  +I  V  +IL + G    +         G  +  I  G + L +  S +G++ + 
Sbjct: 174 VQLVFIIVFVALSILKLSGQAEPVSLLAPLHHDGFSVPLIMTGAAVLCL--SFLGFDAVS 231

Query: 203 NYSLEVENPEKTIPKAALVSVIAMSIVYLIVSGALQVLDIGKLGLIDPISGISLILYPLF 262
             + E  NP   IP A L   +   +++L+VS   Q++        DP S    ++  + 
Sbjct: 232 TMAEETSNPTYRIPVAILAVSLIGGLLFLVVSYCAQMVFPDWGSFADPDSASVDVMRRVG 291

Query: 263 GQYSSIILSLTITGLCLCSFLMLIGGASRLVYAQAKDGVFPKIF-----KYRSNTNAPLS 317
           G+      + T    C  S ++     SR+++A  +DG  P+ F     K R    A L 
Sbjct: 292 GELLVTAFTATYVAGCFASAMVSQASVSRVLFAMGRDGALPRAFGQLVTKKRVPATAILV 351

Query: 318 AVLLMVFANFLTLFAVYFNLISFNEIIA--AVNAFLITNIIM 357
             LL + A  +TL  V  N+ISF  + A  AVN  ++ + ++
Sbjct: 352 VSLLSLIALVITLDTV-ANMISFGALFAFSAVNLAVVKHYLV 392