Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 439 a.a., Putrescine/proton symporter, putrescine/ornithine antiporter PotE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 105/431 (24%), Positives = 192/431 (44%), Gaps = 46/431 (10%)

Query: 3   SKKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCL 62
           S K+G   L+ L +  ++GSGI+++P  + ++    SI +W++   +G +   +A   C 
Sbjct: 6   SNKMGVVQLTILTMVNMMGSGIIMLPTKLSEV-GTISIISWLVT-AVGSMALAWAFAKCG 63

Query: 63  KFPGDSG-LTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFS------- 114
            F   SG +     ++FGKS   +  Y   +++ +A + + + A  Y + LF        
Sbjct: 64  MFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGAALTPLQ 123

Query: 115 -NYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTI-LFYRKDA 172
              A  A  +   +   GG  ++  ISSV        TV   I+ V GL  I  F+   +
Sbjct: 124 IGLATIAVLWVCTIANFGGARITGQISSV--------TVWGVIIPVVGLCIIGWFWFSPS 175

Query: 173 LFTGTGIST-----IDVGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMS 227
           ++  +           VG S  +  W+ +G E     +  VENPEK +P A L   +  +
Sbjct: 176 MYVASWNPHHVPFFSAVGSSIAMTLWAFLGLESACANADVVENPEKNVPIAVLGGTLGAA 235

Query: 228 IVYLIVSGALQVLDIGKLGLIDPISGISLILYPLFGQYSSIILSLTITGLCLCSFLMLIG 287
           ++Y++ +  +  + +  + L +  +   L    +F      ++   +   C  S L    
Sbjct: 236 VIYIVSTNVIAGI-VPNMDLANSTAPFGLAFAQMFTPAVGKVIMALMVMSCCGSLLGWQF 294

Query: 288 GASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMVFANF-LTLFAVYFNLIS-FNEIIA 345
             +++  + A +G FPK+F   +  +AP+  +L++V     L+L  +  +L S FN +  
Sbjct: 295 TIAQVFKSSADEGYFPKVFSRVTKVDAPVQGMLIIVIIQTGLSLMTISPSLNSQFNVL-- 352

Query: 346 AVNAFLITNII-----MAAVASIKVFENVMEK-----GFAVFLLVSFLLMFLFSSKMVIL 395
            VN  ++TNII     MAA+  I+   NV         F  F+   +    L+SS     
Sbjct: 353 -VNLAVVTNIIPYILSMAALVIIQKMANVPSSKAKVANFVAFVGAMYSFYALYSSGEE-- 409

Query: 396 IILAMLFGTVV 406
              AML+G++V
Sbjct: 410 ---AMLYGSIV 417