Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 420 a.a., Putative permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 90/406 (22%), Positives = 169/406 (41%), Gaps = 24/406 (5%)

Query: 4   KKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLK 63
           K+LG      L+   +LG+G+  +P +      D S++AW +++ +    A   + L   
Sbjct: 13  KELGLVQGVILLTTSLLGTGVFALPELAALAAGDISLWAWPLLIILIFPIAIVFAVLGRH 72

Query: 64  FPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFS----NYAFG 119
           FP   G+   VG +FG   + + ++  L  + ++    + +A  +   LF        FG
Sbjct: 73  FPHAGGVAHFVGMAFGPRLQRVISWLFLSVIPVSFPAALHIAVGFGQALFGWQSEQLLFG 132

Query: 120 AEFYSAVLMLIG--GVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKDALFTGT 177
                 +L  +G  G   S N+ ++  I+ LI  +I+ IL  G +        D  F   
Sbjct: 133 ELGTLGLLWFMGSRGASSSANLQAI--IAGLIIALIAAILWKGAIKPA-----DITFPAA 185

Query: 178 GISTID-VGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMSIVYLIVSGA 236
              T   +  +  IMFW  +G E   + S E +NPE+  P+A ++ ++    +Y   +  
Sbjct: 186 NEITFSRLCTALAIMFWGFVGIEAFTHLSSEFKNPERDFPRALIIGLMLAGSIYWTCTAV 245

Query: 237 LQVLDIGKLG-LIDPISGISLILYPLFGQYSSIILSLTITGLCLCSFLMLIGGASRLVYA 295
             VL  G     I   + + LI+  LFG  +  I  +     C  S  +     +RL++ 
Sbjct: 246 --VLHFGVYSDKIAATASLPLIIVHLFGIQALWIACIIGYLTCFASLNVYAQSFARLIWT 303

Query: 296 QAK---DGVFPKIFKYRSNTNAPLSAVLLMVFANFLTLFAVYFNLISFNEIIAAVNAFLI 352
           Q +   D    ++    S    PL A+ +++    ++   VY   I+ N +I   N   I
Sbjct: 304 QMQYQPDHYLAQL----SPGRLPLHALNVILACCCVSSLVVYALKINLNALIVYANGIFI 359

Query: 353 TNIIMAAVASIKVFENVMEKGFAVFLLVSFLLMFLFSSKMVILIIL 398
              ++  +A  ++ +           L+  LL+ +   K +  II+
Sbjct: 360 MLYLLCMLAGCRLLKGRCYALAVTGCLLCLLLLVMLGWKSLYAIIM 405