Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 457 a.a., proline-specific permease ProY from Escherichia coli ECRC62

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 72/338 (21%), Positives = 134/338 (39%), Gaps = 35/338 (10%)

Query: 49  IGGVFAYFASK----LCLKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMV 104
           IGG+ AY   +    + +  P  S  +     + G     +  +     + +  +  +  
Sbjct: 50  IGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTA 109

Query: 105 AGEYLSVLFSNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFT 164
            G Y+ V F          S VL++    ++S  +    +       V + I+++   F 
Sbjct: 110 FGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFG 169

Query: 165 ILFYRKDALFTGTGISTI-------DVGYSFLIMFWSII-----GWEILGNYSLEVENPE 212
           I+ +        TGI  +         G+  ++M   ++     G EI+G  + E ++PE
Sbjct: 170 IIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPE 229

Query: 213 KTIPKAALVSVIAMSIVYLIVSGALQVLDIGKLGLIDPISGISLILYPLFG-QYSSIILS 271
           K+IP+A  ++ + M I+   V     ++ I     +       ++ +   G  +++ IL+
Sbjct: 230 KSIPRA--INSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILN 287

Query: 272 LTITGLCLCSFLMLIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMVFANFLTLF 331
             +    L +    + G  R+++  A+ G  PKIF   S    P   VL+M  A    LF
Sbjct: 288 FVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTA---LLF 344

Query: 332 AVYFNLISFNEIIAAVNAFLITNIIMAAVASIKVFENV 369
           AVY N       I   N FL+       +AS+  F  V
Sbjct: 345 AVYLN------YIMPENVFLV-------IASLATFATV 369