Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 439 a.a., putrescine-ornithine antiporter from Escherichia coli ECRC62

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 104/432 (24%), Positives = 194/432 (44%), Gaps = 48/432 (11%)

Query: 3   SKKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCL 62
           S K+G   L+ L +  ++GSGI+++P  + ++    SI +W++   +G +   +A   C 
Sbjct: 6   SNKMGVVQLTILTMVNMMGSGIIMLPTKLAEV-GTISIISWLVT-AVGSMALAWAFAKCG 63

Query: 63  KFPGDSG-LTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVA--------GEYLSVLF 113
            F   SG +     ++FGKS   +  Y   +++ +A + + + A        G  LS + 
Sbjct: 64  MFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLSPVQ 123

Query: 114 SNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTI-LFYRKDA 172
              A     +   +   GG  ++  ISS+        TV   I+ V GL  I  F+    
Sbjct: 124 IGLATIGVLWICTVANFGGARITGQISSI--------TVWGVIIPVVGLCIIGWFWFSPT 175

Query: 173 LFTGT-----GISTIDVGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMS 227
           L+  +           VG S  +  W+ +G E     +  VENPE+ +P A L   +  +
Sbjct: 176 LYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAA 235

Query: 228 IVYLIVSGALQVLDIGKLGLIDPISGISLILYPLF-GQYSSIILSLTITGLCLCSFLMLI 286
           ++Y++ +  +  + +  + L +  +   L    +F  +   +I++L +   C  S L   
Sbjct: 236 VIYIVSTNVIAGI-VPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMS-CCGSLLGWQ 293

Query: 287 GGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVL-LMVFANFLTLFAVYFNLIS-FNEII 344
              +++  + + +G FPKIF   +  +AP+  +L +++  + L L  +  +L S FN + 
Sbjct: 294 FTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVL- 352

Query: 345 AAVNAFLITNII-----MAAVASIKVFENVMEK-----GFAVFLLVSFLLMFLFSSKMVI 394
             VN  ++TNII     MAA+  I+   NV         F  F+   +    L+SS    
Sbjct: 353 --VNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEE- 409

Query: 395 LIILAMLFGTVV 406
               AML+G++V
Sbjct: 410 ----AMLYGSIV 417