Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 444 a.a., cadaverine/lysine antiporter from Escherichia coli ECRC62

 Score = 77.4 bits (189), Expect = 8e-19
 Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 43/343 (12%)

Query: 2   SSKKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLC 61
           S+KK+G +  +G++ G ++GSGI ++P  +  I    +I+ W+I +      AY  ++L 
Sbjct: 3   SAKKIGLFACTGVVAGNMMGSGIALLPANLASI-GGIAIWGWIISIIGAMSLAYVYARLA 61

Query: 62  LKFPGDSGLTEVVGH---SFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFSNY-- 116
            K P   G     G    +FG  ++    YY   A  +  L + + A  YLS  F     
Sbjct: 62  TKNPQQGGPIAYAGEISPAFG--FQTGVLYYH--ANWIGNLAIGITAVSYLSTFFPVLND 117

Query: 117 -------AFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYR 169
                       +    + ++GG  +SR ++++G + +LI  V++ I        + ++ 
Sbjct: 118 PVPAGIACIAIVWVFTFVNMLGGTWVSR-LTTIGLVLVLIPVVMTAI--------VGWHW 168

Query: 170 KDALFTGTGISTIDV--GY----SFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSV 223
            DA       +T D   G+    S L+  W+ +G E     +  V+NP++T+P A ++  
Sbjct: 169 FDAATYAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGT 228

Query: 224 IAMSIVYLIVSGALQVLDIGKLGLIDPISG--ISLILYPLFGQYSSIILSLTITGLCLC- 280
               IVY+    A QVL       +   SG   ++    + G +++ ++S      CL  
Sbjct: 229 GLAGIVYI---AATQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTS 285

Query: 281 --SFLMLIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLL 321
             S++ML+G A       A DG FPK++    +   P   +LL
Sbjct: 286 LGSWMMLVGQAG---VRAANDGNFPKVYGEVDSNGIPKKGLLL 325