Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 461 a.a., putrescine/proton symporter PuuP from Escherichia coli ECRC100

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 76/333 (22%), Positives = 138/333 (41%), Gaps = 36/333 (10%)

Query: 46  MMTIGGVF--AYFASKLCLKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIM 103
           ++ + GV   A    KL  +FP           S       +  +  L+     P++ ++
Sbjct: 60  LLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVL 119

Query: 104 VAGEYLSVLFSNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLF 163
           +A  YLS LF          + V +L    + S N+  V   + L   V  +I+VV    
Sbjct: 120 LAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNL--VANFNTLFVLVQISIMVV---- 173

Query: 164 TILFYRKDALFTGTGISTIDVGYSFL--------------IMFWSIIGWEILGNYSLEVE 209
             +F     L  G G+ T+     F+              I+ +S +G++ +   S E  
Sbjct: 174 -FIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETP 232

Query: 210 NPEKTIPKAALVSVIAMSIVYLIVSGALQVL--DIGKLGLIDPISGISLILYPLFGQ-YS 266
           +  + IPKA  ++ +   ++++  S  +Q+   DI +    DP + +  I   + G+ + 
Sbjct: 233 DAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFK--DPDAALPEIALYVGGKLFQ 290

Query: 267 SIILSLTITGLCLCSFLMLIGGASRLVYAQAKDGVFP-KIFKY-RSNTNAPLSAVLLMVF 324
           SI L  T     L S L      SRL+Y   +D VFP ++F Y       P    L ++ 
Sbjct: 291 SIFLCTTFVNT-LASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTP---ALNVIM 346

Query: 325 ANFLTLFAVYFNLISFNEII--AAVNAFLITNI 355
              + + A++F+L++   +I   A+ AF   N+
Sbjct: 347 VGIVAMSALFFDLVTATALINFGALVAFTFVNL 379