Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 418 a.a., putative transporter from Escherichia coli BL21

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 93/402 (23%), Positives = 175/402 (43%), Gaps = 25/402 (6%)

Query: 13  GLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLKFPGDSGLTE 72
           GL+   +LG+G+  +P +   +  + S++AW +++ +    A   + L   +P   G+  
Sbjct: 15  GLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAH 74

Query: 73  VVGHSFGKSYKNLNAYYLLIAMAMA-PLVVIMVAGEYLSVLFSNYAFGAEFYSAVLMLIG 131
            VG +FG   + +  +  L  + +  P  + + AG      F    FG   +  +L  +G
Sbjct: 75  FVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAG------FGQAMFGWHSWQLLLAELG 128

Query: 132 GVILSRNISSVGKISML-ISTVISTILVVGGLFTILFYRKDAL-----FTGTG-ISTIDV 184
            + L   I + G  S   + TVI+ ++V   L   +++  D       F   G I    +
Sbjct: 129 TLALVWYIGTRGASSSANLQTVIAGLIV--ALIVAIWWAGDIKPASIPFPAPGNIELTGL 186

Query: 185 GYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMSIVYLIVSGALQVLDIGK 244
             +  +MFW  +G E   + + E +NPE+  P+A ++ ++   +VY      + VL    
Sbjct: 187 FAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYW--GCTVVVLHFDA 244

Query: 245 LG-LIDPISGISLILYPLFGQYSSIILSLTITGLCLCSFLMLIGGASRLVYAQAKDGVFP 303
            G  +   + +  I+  LFG  +  I  +     C  S  + I   +RLV++QA+     
Sbjct: 245 YGEQMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDH 304

Query: 304 KIFKYRSN--TNAPLSAVLLMVFANFLTLFAVYFNLISFNEIIAAVNAFLITNIIMAAVA 361
            + +  S    N  L+AVL     + L + A+  NL   + +I   N   I   ++  +A
Sbjct: 305 YLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINL---DALIIYANGIFIMIYLLCMLA 361

Query: 362 SIKVFENVMEKGFAVFLLVSFLLMFLFSSK-MVILIILAMLF 402
             K+ +        V  L+  LL+ +   K +  LI+LA L+
Sbjct: 362 GCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLW 403