Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 452 a.a., putrescine importer, low affinity from Escherichia coli BL21

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 80/393 (20%), Positives = 163/393 (41%), Gaps = 50/393 (12%)

Query: 41  FAWVIMMTIGGVFAYFASKLCLKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLV 100
           +A+ ++  +    +Y   KL  ++P           S   +   +  +  L+    AP++
Sbjct: 55  YAFALIAILFTALSY--GKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMI 112

Query: 101 VIMVAGEYLSVLFSNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVG 160
            I++A  Y   L  +    +  +   L+        R++ SV   + +I  V+  ++++ 
Sbjct: 113 NILLAKIYFEALVPSIP--SWMFVVALVAFMTAFNLRSLKSVANFNTVI--VVLQVVLIA 168

Query: 161 GLFTILFYRKDALFTGTGISTIDVGYSF--------------LIMFWSIIGWEILGNYSL 206
            +  ++ Y    +F G G  T+     F               I+ +S  G++ + N S 
Sbjct: 169 VILGMVVY---GVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSE 225

Query: 207 EVENPEKTIPKAALVSVIAMSIVYLIVSGALQVL--DIGKLGLIDPISGISLILYPLFGQ 264
           E ++ E+ IP+A  ++ +   ++++  +  LQ+   DI +    DP +    I+  + G+
Sbjct: 226 ETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFK--DPDASQPEIMLYVAGK 283

Query: 265 YSSIILSLTITGLCLCSFLMLIGGASRLVYAQAKDGVFPKIF------KYRSNTNAPLSA 318
              +   +  T   L S +    G +RL+Y   +DGVFPK F      K+R       + 
Sbjct: 284 AFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR-------TP 336

Query: 319 VLLMVFANFLTLFAVYFNLISFNEII--AAVNAFLITNIIMAAVASIKVFENVMEKGFAV 376
            + ++    + L A+ F+L+    +I   A+ AF   N+ + +   I+   N   K    
Sbjct: 337 AMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQ 396

Query: 377 FLL--------VSFLLMFLFSSKMVILIILAML 401
           +L         V  L + L  S MV+ +I A +
Sbjct: 397 YLFLPMCGALTVGALWVNLEESSMVLGLIWAAI 429