Pairwise Alignments

Query, 201 a.a., ribonuclease H family protein from Methanococcus maripaludis S2

Subject, 154 a.a., ribonuclease H from Magnetospirillum magneticum AMB-1

 Score = 45.4 bits (106), Expect = 5e-10
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 64  KKDVMHAWVDGSFNLKNKEYGAGALILFNGIEKEIKAKGNDTELSKMRNVAGEILASELA 123
           K + +  + DG+ +      G GA++ F GIEKE+K   + T  ++M  +A  +  + L 
Sbjct: 7   KPETVEIYTDGACSGNPGPGGWGAILRFKGIEKELKGGESPTTNNRMEMMAVLVALNTLT 66

Query: 124 MEYAVSKNVKNLVIYHD--YI--GIEKWCTG----EWKT--NKSGTIEYIEKCIN-YLKK 172
              AV        +Y D  Y+  G+ +W  G     WKT   K    + + K ++    +
Sbjct: 67  RSCAVD-------VYTDSEYVKKGMTEWLRGWKARGWKTADKKPVKNDDLWKALDEAAAR 119

Query: 173 LNIEFVKVKAHSGDKNNEIADKLAKESL 200
             + +  VK H+G   NE AD LA+E +
Sbjct: 120 HKVSWHWVKGHAGHPENERADALAREGI 147