Pairwise Alignments

Query, 434 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 438 a.a., 2-deoxy-D-ribonate transporter 1 (from data) from Pseudomonas simiae WCS417

 Score = 80.9 bits (198), Expect = 7e-20
 Identities = 98/399 (24%), Positives = 172/399 (43%), Gaps = 30/399 (7%)

Query: 17  IFAVLALVYFFVYFHRVSPAVMAGDLMTTFGVGATSMGLLGSVYFYAYALMQIPSGIMSD 76
           +  +L + Y   +  R + A+    L    G+ A + GL   ++F  YAL +IPS ++  
Sbjct: 21  LMPLLIIAYILSFLDRTNIALAKHHLDVDLGISAAAYGLGAGLFFLTYALSEIPSNLIMH 80

Query: 77  KFGPR----RVVAVFTLVTAAGAILTGIATDFNMVIMGRLLIGIGAAAVYIPIMKMLSIW 132
           K G R    R++  + L++AA A + G  T F ++   RLL+GI  A ++  +M  L+ W
Sbjct: 81  KVGARFWIARIMVTWGLISAAMAFVQG-ETSFYVL---RLLLGIAEAGLFPGVMLYLTYW 136

Query: 133 FRKNEFATQSGMML---AVGNIGALSAAAPLAYLNTAL---GWQTVFTGLGVASIALAIL 186
           F + + A  +G  L      NI      A L  ++  L   GWQ +F   G+ ++A A +
Sbjct: 137 FNREQRARATGYFLLGVCFANIIGGPVGAALMRMDGMLGWHGWQWMFMLEGLPAVAFAWV 196

Query: 187 SYIVVRDKPSEMGFANIEDIEAHENGETVSAEAKPAENISIMDSIKMVLGKKSFWPLAIW 246
            +  + D+PS+  + + E+    E       E    E      S+K  L  +    LAI+
Sbjct: 197 VWRKLPDRPSKAPWLSAEEARGIEQRIAQETEEGAGEG---GHSLKNWLTPQIL--LAIF 251

Query: 247 FFFYYGSLMAYQGLWAGPYLKDILGWDKATYAGLLTFI-GIGLIIGCPVSGYIADKVLKS 305
            +F +  +  Y  ++  P +    G       GLLT +  I   +G  +    A      
Sbjct: 252 VYFCH-QITIYTVIFFLPSIISKYGELSTMSVGLLTSLPWIAAALGALLIPRFA--TTPG 308

Query: 306 RKKTLIIGTIMYTLLWFAVWYFNGMDNPLFYKILYLLFG--FFAGFFVVCYGQVKSLFPI 363
           R + L++  ++   L   +   +G   P+F  + + L    FF    ++       L  +
Sbjct: 309 RCRRLLVTGLLTMALGLGIASVSG---PVFSLLGFCLSAVMFFVVQSIIFLYPASRLKGV 365

Query: 364 SITGTSTSLLNFFPFFGGAVLQQVCGLVIASYGLNALGG 402
           ++ G     +N     GG V   V G++  S G NA+ G
Sbjct: 366 ALAG-GLGFVNACGLLGGFVGPSVMGVIEQSTG-NAMNG 402