Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score =  162 bits (409), Expect = 3e-44
 Identities = 127/457 (27%), Positives = 178/457 (38%), Gaps = 114/457 (24%)

Query: 1   MIKINTEDCYMCKACENSCPTEALKLNPF-------KVCQLCGNCVNVCPNDALNLREIE 53
           MI      C  C  C   CPT A+K N +       K+C  CG C NVCP D +++RE +
Sbjct: 37  MIDGKAFSCITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIRE-D 95

Query: 54  LNGKTIKQIAYFPT-KCDLCGECVKVCPNNLKIEND--------------------KLKG 92
             GK+      +PT  C +CG C   CP N ++  D                    K+ G
Sbjct: 96  STGKS------YPTGMCVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMG 149

Query: 93  ------------------------------FCVGCMKCVDACP-DSYVGMEGVVEPAKRN 121
                                          CV C KC+  CP D+ +  E V    + N
Sbjct: 150 KTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCN 209

Query: 122 ITLPKEPI------AVTEDCVGCGVCISECPVGALSIEGEKAVVDKDS--------CIYC 167
           I     P+       VTE+C+ CG CIS+CP   L I   K V  K+         CI C
Sbjct: 210 ICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINC 269

Query: 168 SICAQTCPWNAI-FVAGK---------------KSPKRDKNIVKFSVDSDLCIGCGDCTD 211
            +C   CP NA+ F  GK               K   +   I K       C+ C  C  
Sbjct: 270 GLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCVLCELCIK 329

Query: 212 KCPRDLIVLNE---MVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEE 268
           +CP D I + E     ++  + C ACG C   CP DAI +V++  +         V   +
Sbjct: 330 ECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFND 389

Query: 269 KCAYCGPCAIKCPNNAITVVNPKG-LEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRI 327
            C  C  CAI CP + I   N  G  ++  R+ +    +   C++CG C   CPNDA+  
Sbjct: 390 NCVICEKCAIHCPRDVIE--NTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAIDK 447

Query: 328 GKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKL 364
           G            E +   C+ C  C+  CP   +++
Sbjct: 448 G------------EINTEKCEYCSACVNICPTRAIRI 472



 Score =  158 bits (400), Expect = 3e-43
 Identities = 116/396 (29%), Positives = 171/396 (43%), Gaps = 79/396 (19%)

Query: 21  TEALKLNPFKVCQLCGN-----CVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGEC 75
           T+  K   ++ C+ C N     C+ VCP +A+ +    ++GK           C  CG C
Sbjct: 4   TDIKKCRTYEECEDCKNKEISKCMEVCPTNAIKM----IDGKAFS--------CITCGTC 51

Query: 76  VKVCPNNLKIENDKLKGF------CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPI 129
            K CP    I+ ++  G+      C GC  C + CP   + +       + + T    P 
Sbjct: 52  AKECPTGA-IKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDI-------REDSTGKSYPT 103

Query: 130 AVTEDCVGCGVCISECPVGA--------LSIEGEKAVVDKDSCIYCSICAQTCPWNAIFV 181
            +   CV CG+C +ECP  A        L     K ++++ S I+  +  +T  +     
Sbjct: 104 GM---CVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIF-KMMGKTYEFPEPKH 159

Query: 182 AGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAAC 241
                P   K     S+DS  C+ CG C   CP+D I+  EMV     GC  C +C   C
Sbjct: 160 VKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMV----DGCTRCNICNEVC 215

Query: 242 PVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKT 301
           PVDAIE              G V   E C  CG C  KCP + + +      ++   K+ 
Sbjct: 216 PVDAIEY-------------GQV--TENCILCGNCISKCPKDVLEI---SEFKVVKTKED 257

Query: 302 EKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDM 361
            KA   K CI CG CV  CP++ALR      NGK    I + P  C  C  C++ CP  +
Sbjct: 258 VKAKPEKHCINCGLCVDKCPSNALR----FENGK----ILYDPKTCTLCNTCVKECPQGV 309

Query: 362 LKLTGKSEKPLEGFCVMCLKCIEACDKAKKSALSLK 397
               G+    ++G CV+C  CI+ C    + A+S+K
Sbjct: 310 RINKGEF---VDGGCVLCELCIKEC---PEDAISIK 339