Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 167 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis S2

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 94  CVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIE 153
           C  C  CV +C + +  + G+         LP     V + C     C+  CPV A+  +
Sbjct: 11  CDNCGDCVKSCSEVHE-VSGISIWEHEGRYLP----VVCQHCTS-SPCMEVCPVSAIESK 64

Query: 154 GEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKC 213
                +DK+SCI C +CA  CP+ AI+++GK + K D   + F  D   C+    C+ +C
Sbjct: 65  DGVIYLDKESCIGCGLCAMACPFGAIYISGKTAHKCD---LCFGRDEQACVKA--CSKRC 119

Query: 214 PRDLIVLNEMV 224
             +++ ++E+V
Sbjct: 120 -LEVVNVDELV 129



 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 33/151 (21%)

Query: 59  IKQIAYFPTKCDLCGECVKVCPNNLKI--------ENDKLKGFCVGCMK--CVDACPDSY 108
           +K++      CD CG+CVK C    ++        E   L   C  C    C++ CP S 
Sbjct: 1   MKKVMMVNEACDNCGDCVKSCSEVHEVSGISIWEHEGRYLPVVCQHCTSSPCMEVCPVSA 60

Query: 109 V-GMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYC 167
           +   +GV+   K             E C+GCG+C   CP GA+ I G+ A      C  C
Sbjct: 61  IESKDGVIYLDK-------------ESCIGCGLCAMACPFGAIYISGKTA----HKCDLC 103

Query: 168 -----SICAQTCPWNAIFVAGKKSPKRDKNI 193
                  C + C    + V        DK +
Sbjct: 104 FGRDEQACVKACSKRCLEVVNVDELVMDKKL 134



 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 33/143 (23%)

Query: 195 KFSVDSDLCIGCGDCTDKCPR-----DLIVLNEMVAVPPKGCPAC--GLCKAACPVDAIE 247
           K  + ++ C  CGDC   C        + +        P  C  C    C   CPV AIE
Sbjct: 3   KVMMVNEACDNCGDCVKSCSEVHEVSGISIWEHEGRYLPVVCQHCTSSPCMEVCPVSAIE 62

Query: 248 LVVEYASPKPITDEGIVW-DEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANE 306
                      + +G+++ D+E C  CG CA+ CP  AI +              + A++
Sbjct: 63  -----------SKDGVIYLDKESCIGCGLCAMACPFGAIYI------------SGKTAHK 99

Query: 307 FKMCIRCG--ACVQSCPNDALRI 327
             +C      ACV++C    L +
Sbjct: 100 CDLCFGRDEQACVKACSKRCLEV 122



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 30  KVCQLCGNCVNVCPNDALNLREIELNGKTI--KQIAYFPTKCDLC--GECVKVCPNNLKI 85
           + C  CG+CV  C          E++G +I   +  Y P  C  C    C++VCP +   
Sbjct: 9   EACDNCGDCVKSCS------EVHEVSGISIWEHEGRYLPVVCQHCTSSPCMEVCPVSAIE 62

Query: 86  ENDKL----KGFCVGCMKCVDACPDSYVGMEG 113
             D +    K  C+GC  C  ACP   + + G
Sbjct: 63  SKDGVIYLDKESCIGCGLCAMACPFGAIYISG 94



 Score = 39.7 bits (91), Expect = 6e-08
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 36/133 (27%)

Query: 268 EKCAYCGPCAIKCPN----NAITVVNPKGLEMPSRKKTEKANEFKMCIRCGA--CVQSCP 321
           E C  CG C   C      + I++   +G  +P            +C  C +  C++ CP
Sbjct: 9   EACDNCGDCVKSCSEVHEVSGISIWEHEGRYLPV-----------VCQHCTSSPCMEVCP 57

Query: 322 NDALRIGK-IIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCL 380
             A+     +I+  KE          C  CG C   CP+  + ++GK+       C +C 
Sbjct: 58  VSAIESKDGVIYLDKES---------CIGCGLCAMACPFGAIYISGKTAHK----CDLCF 104

Query: 381 -----KCIEACDK 388
                 C++AC K
Sbjct: 105 GRDEQACVKACSK 117



 Score = 26.6 bits (57), Expect = 5e-04
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 7/60 (11%)

Query: 1   MIKINTEDCYMCKACENSCPTEALKLN--PFKVCQLCGN-----CVNVCPNDALNLREIE 53
           +I ++ E C  C  C  +CP  A+ ++      C LC       CV  C    L +  ++
Sbjct: 67  VIYLDKESCIGCGLCAMACPFGAIYISGKTAHKCDLCFGRDEQACVKACSKRCLEVVNVD 126