Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 36/182 (19%)

Query: 7   EDCYMCKACENSCPTEALKLNPFK--VCQLCGNCVNVCPNDALNLREIELNGKTIKQIAY 64
           +DC  C  C + CPT A+ +  F+  +C+ CG C+NVCP DA+      ++         
Sbjct: 44  DDCICCGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVD--------- 94

Query: 65  FPTKCDLCGEC-----VKVCPNNLKIEN-DKLKGFCVGCMKCVDACPDSYVGMEGVVEPA 118
            P KC  CG C     + +  N + + N  ++   C  C  C+  CP   +  E      
Sbjct: 95  -PEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFE------ 147

Query: 119 KRNITLPKEPIAVTEDCVGCGVCISECPVGAL-----SIEGEKAVVDKDSCIYCSICAQT 173
                     I++   C  C  C+  CP+ AL     S++ +   VD +SCI+C  C + 
Sbjct: 148 -------DGKISINSKCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEI 200

Query: 174 CP 175
           CP
Sbjct: 201 CP 202



 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 66/197 (33%), Positives = 79/197 (40%), Gaps = 42/197 (21%)

Query: 201 DLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITD 260
           D CI CG C D CP + I + +   +    C  CG C   CPVDAIE             
Sbjct: 44  DDCICCGLCVDVCPTNAISVFKFRDII---CEHCGACLNVCPVDAIE------------K 88

Query: 261 EGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSC 320
                D EKC  CG C+I C     T+   K  E+P     E   E   C  C  C+Q C
Sbjct: 89  NRFSVDPEKCIKCGVCSIFC-----TIPILKN-EIPVLNVPEVTTE---CNNCKLCIQKC 139

Query: 321 PNDALRI--GKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLK-----LTGKSEKPLE 373
           P  A+    GKI  N K           C+ C KC+E CP + LK     L  K  K   
Sbjct: 140 PQKAISFEDGKISINSK-----------CNLCLKCVEFCPLNALKSPKESLKSKIIKVDL 188

Query: 374 GFCVMCLKCIEACDKAK 390
             C+ C  C E C   K
Sbjct: 189 NSCIFCKDCEEICPVKK 205



 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 59/205 (28%), Positives = 83/205 (40%), Gaps = 38/205 (18%)

Query: 154 GEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKC 213
           GE    + D CI C +C   CP NAI V              F     +C  CG C + C
Sbjct: 36  GETTNPELDDCICCGLCVDVCPTNAISV--------------FKFRDIICEHCGACLNVC 81

Query: 214 PRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYC 273
           P D I  N   +V P+ C  CG+C   C +  ++  +   +   +T E        C  C
Sbjct: 82  PVDAIEKNRF-SVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTE--------CNNC 132

Query: 274 GPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHN 333
             C  KCP  AI+  + K + + S+           C  C  CV+ CP +AL+  K    
Sbjct: 133 KLCIQKCPQKAISFEDGK-ISINSK-----------CNLCLKCVEFCPLNALKSPK---E 177

Query: 334 GKEYERIEFSPNLCDSCGKCIETCP 358
             + + I+   N C  C  C E CP
Sbjct: 178 SLKSKIIKVDLNSCIFCKDCEEICP 202



 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 40/194 (20%)

Query: 133 EDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKN 192
           +DC+ CG+C+  CP  A+S+   + ++    C +C  C   CP +AI          +KN
Sbjct: 44  DDCICCGLCVDVCPTNAISVFKFRDII----CEHCGACLNVCPVDAI----------EKN 89

Query: 193 IVKFSVDSDLCIGCGDCTDKC-----PRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIE 247
             +FSVD + CI CG C+  C       ++ VLN  V      C  C LC   CP  AI 
Sbjct: 90  --RFSVDPEKCIKCGVCSIFCTIPILKNEIPVLN--VPEVTTECNNCKLCIQKCPQKAIS 145

Query: 248 LVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEF 307
                       ++G +    KC  C  C   CP NA+   +PK     S K      + 
Sbjct: 146 F-----------EDGKISINSKCNLCLKCVEFCPLNALK--SPK----ESLKSKIIKVDL 188

Query: 308 KMCIRCGACVQSCP 321
             CI C  C + CP
Sbjct: 189 NSCIFCKDCEEICP 202



 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 6   TEDCYMCKACENSCPTEALKLNPFKV-----CQLCGNCVNVCPNDALNLREIELNGKTIK 60
           T +C  CK C   CP +A+     K+     C LC  CV  CP +AL   +  L  K IK
Sbjct: 126 TTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNALKSPKESLKSKIIK 185

Query: 61  QIAYFPTKCDLCGECVKVCP 80
                   C  C +C ++CP
Sbjct: 186 VDL---NSCIFCKDCEEICP 202



 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 14/81 (17%)

Query: 306 EFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLT 365
           E   CI CG CV  CP +A+ + K            F   +C+ CG C+  CP D ++  
Sbjct: 42  ELDDCICCGLCVDVCPTNAISVFK------------FRDIICEHCGACLNVCPVDAIEKN 89

Query: 366 GKSEKPLEGFCVMCLKCIEAC 386
             S  P +  C+ C  C   C
Sbjct: 90  RFSVDPEK--CIKCGVCSIFC 108



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 1   MIKINTEDCYMCKACENSCPTE 22
           +IK++   C  CK CE  CP +
Sbjct: 183 IIKVDLNSCIFCKDCEEICPVK 204



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 13/61 (21%)

Query: 332 HNGKEYERIEFSPNLCDSCGKCIETCPYDMLK------LTGKSEKPLEGFCVMCLKCIEA 385
           H G+E+ +I        S GK ++   +++ +      + G++  P    C+ C  C++ 
Sbjct: 3   HEGEEFNKIF-------SKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDV 55

Query: 386 C 386
           C
Sbjct: 56  C 56