Pairwise Alignments
Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 242 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1
Score = 49.3 bits (116), Expect = 1e-10
Identities = 35/103 (33%), Positives = 44/103 (42%), Gaps = 19/103 (18%)
Query: 92 GFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGV----------- 140
G C+GC C C ME V PA T D VG V
Sbjct: 50 GKCIGCQACTIGCI-----MENRV-PADSFRTFVSTYEVTEGDKVGTYVLPRLCNHCSDP 103
Query: 141 -CISECPVGALSIEGEKAV-VDKDSCIYCSICAQTCPWNAIFV 181
C+ CPVGA + + AV VD D C+ C+ C Q CP++A F+
Sbjct: 104 PCVGVCPVGATFQQKDGAVMVDSDRCVGCAYCVQACPYDARFI 146
Score = 42.4 bits (98), Expect = 1e-08
Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 28/119 (23%)
Query: 135 CVGCGVCISEC------PVGALSI--------EGEKA--VVDKDSCIYCSI--CAQTCPW 176
C+GC C C P + EG+K V C +CS C CP
Sbjct: 52 CIGCQACTIGCIMENRVPADSFRTFVSTYEVTEGDKVGTYVLPRLCNHCSDPPCVGVCPV 111
Query: 177 NAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACG 235
A F ++D ++ VDSD C+GC C CP D +N K C CG
Sbjct: 112 GATF------QQKDGAVM---VDSDRCVGCAYCVQACPYDARFINHETNTADK-CTFCG 160
Score = 35.0 bits (79), Expect = 2e-06
Identities = 37/129 (28%), Positives = 47/129 (36%), Gaps = 26/129 (20%)
Query: 158 VVDKDSCIYCSICAQTC------PWNAI--FVAGKKSPKRDKNIVKFSVDSDLCIGCGD- 208
VVD CI C C C P ++ FV+ + + DK V V LC C D
Sbjct: 46 VVDLGKCIGCQACTIGCIMENRVPADSFRTFVSTYEVTEGDK--VGTYVLPRLCNHCSDP 103
Query: 209 -CTDKCPRDLIVLNE--MVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVW 265
C CP + V V C C C ACP DA + E +
Sbjct: 104 PCVGVCPVGATFQQKDGAVMVDSDRCVGCAYCVQACPYDARFINHETNT----------- 152
Query: 266 DEEKCAYCG 274
+KC +CG
Sbjct: 153 -ADKCTFCG 160
Score = 35.0 bits (79), Expect = 2e-06
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 132 TEDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCS---------ICAQTC 174
++ CVGC C+ CP A I E DK C +C C +TC
Sbjct: 126 SDRCVGCAYCVQACPYDARFINHETNTADK--CTFCGHRVAAGLLPACVETC 175
Score = 34.3 bits (77), Expect = 4e-06
Identities = 40/171 (23%), Positives = 50/171 (29%), Gaps = 53/171 (30%)
Query: 198 VDSDLCIGCGDCTDKCPRDLIVLNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKP 257
VD CIGC CT C + + P D+ V
Sbjct: 47 VDLGKCIGCQACTIGC----------------------IMENRVPADSFRTFVSTYEVTE 84
Query: 258 ITDEGIVWDEEKCAYCG--PCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGA 315
G C +C PC CP A T G M + C+ C
Sbjct: 85 GDKVGTYVLPRLCNHCSDPPCVGVCPVGA-TFQQKDGAVMVDSDR---------CVGCAY 134
Query: 316 CVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCG---------KCIETC 357
CVQ+CP DA I + + C CG C+ETC
Sbjct: 135 CVQACPYDARFINHETNTADK----------CTFCGHRVAAGLLPACVETC 175
Score = 32.7 bits (73), Expect = 1e-05
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 23/94 (24%)
Query: 310 CIRCGACVQSC------PNDALRIGKIIHNGKEYERIE--FSPNLCDSCGK--CIETCPY 359
CI C AC C P D+ R + E +++ P LC+ C C+ CP
Sbjct: 52 CIGCQACTIGCIMENRVPADSFRTFVSTYEVTEGDKVGTYVLPRLCNHCSDPPCVGVCP- 110
Query: 360 DMLKLTGKSEKPLEGF-------CVMCLKCIEAC 386
G + + +G CV C C++AC
Sbjct: 111 -----VGATFQQKDGAVMVDSDRCVGCAYCVQAC 139
Score = 30.0 bits (66), Expect = 7e-05
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 17/131 (12%)
Query: 240 ACPVDAIELVVEYASPK---PITDEGIVWDEEKCAYCGPCAIKCPNNAITVVNPKGLEMP 296
A V AI E A+ P +V D KC C C I C + +
Sbjct: 19 AVAVAAIPAAAEAAASPGGDPARRWAMVVDLGKCIGCQACTIGCIMENRVPADSFRTFVS 78
Query: 297 SRKKTE--KANEF---KMCIRCG--ACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDS 349
+ + TE K + ++C C CV CP +G ++ + + C
Sbjct: 79 TYEVTEGDKVGTYVLPRLCNHCSDPPCVGVCP-----VGATFQ--QKDGAVMVDSDRCVG 131
Query: 350 CGKCIETCPYD 360
C C++ CPYD
Sbjct: 132 CAYCVQACPYD 142
Score = 28.1 bits (61), Expect = 3e-04
Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 39/107 (36%)
Query: 9 CYMCKAC------ENSCP-------------TEALKLNPFKVCQLCGNC-----VNVCPN 44
C C+AC EN P TE K+ + + +LC +C V VCP
Sbjct: 52 CIGCQACTIGCIMENRVPADSFRTFVSTYEVTEGDKVGTYVLPRLCNHCSDPPCVGVCPV 111
Query: 45 DALNLREIELNGKTIKQ----IAYFPTKCDLCGECVKVCPNNLKIEN 87
G T +Q + +C C CV+ CP + + N
Sbjct: 112 -----------GATFQQKDGAVMVDSDRCVGCAYCVQACPYDARFIN 147
Score = 26.6 bits (57), Expect = 8e-04
Identities = 17/66 (25%), Positives = 21/66 (31%), Gaps = 19/66 (28%)
Query: 32 CQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGE---------CVKVCPNN 82
C C CV CP DA + I KC CG CV+ C
Sbjct: 129 CVGCAYCVQACPYDA----------RFINHETNTADKCTFCGHRVAAGLLPACVETCVGG 178
Query: 83 LKIEND 88
++ D
Sbjct: 179 ARVFGD 184