Pairwise Alignments

Query, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 244 a.a., radical activating enzyme from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 21/44 (47%), Positives = 25/44 (56%)

Query: 135 CVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNA 178
           C  CG C+S+CP  ALSI+G K V   D C  C  C + CP  A
Sbjct: 4   CNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMCPQQA 47



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 12/51 (23%)

Query: 310 CIRCGACVQSCPNDALRI--GKIIHNGKEYERIEFSPNLCDSCGKCIETCP 358
           C  CG CV  CP+ AL I  GK++          +  ++C+ C  C++ CP
Sbjct: 4   CNDCGECVSQCPHHALSIDGGKVV----------WRSDVCEQCDTCLKMCP 44



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 8/49 (16%)

Query: 32 CQLCGNCVNVCPNDALNLREIELNGKTIKQIAYFPTKCDLCGECVKVCP 80
          C  CG CV+ CP+ AL++      GK    + +    C+ C  C+K+CP
Sbjct: 4  CNDCGECVSQCPHHALSID----GGK----VVWRSDVCEQCDTCLKMCP 44



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 347 CDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEAC 386
           C+ CG+C+  CP+  L + G         C  C  C++ C
Sbjct: 4   CNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMC 43



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 68  KCDLCGECVKVCPNN-LKIENDKL---KGFCVGCMKCVDACPDSYVGM 111
           +C+ CGECV  CP++ L I+  K+      C  C  C+  CP     M
Sbjct: 3   RCNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMCPQQATPM 50



 Score = 34.7 bits (78), Expect = 3e-06
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 6/44 (13%)

Query: 9  CYMCKACENSCPTEALKLNPFKV------CQLCGNCVNVCPNDA 46
          C  C  C + CP  AL ++  KV      C+ C  C+ +CP  A
Sbjct: 4  CNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMCPQQA 47



 Score = 33.1 bits (74), Expect = 9e-06
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 12/55 (21%)

Query: 231 CPACGLCKAACPVDAIELVVEYASPKPITDEG-IVWDEEKCAYCGPCAIKCPNNA 284
           C  CG C + CP  A+ +           D G +VW  + C  C  C   CP  A
Sbjct: 4   CNDCGECVSQCPHHALSI-----------DGGKVVWRSDVCEQCDTCLKMCPQQA 47



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 11/56 (19%)

Query: 269 KCAYCGPCAIKCPNNAITVVNPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDA 324
           +C  CG C  +CP++A+++   K +               +C +C  C++ CP  A
Sbjct: 3   RCNDCGECVSQCPHHALSIDGGKVVWRSD-----------VCEQCDTCLKMCPQQA 47



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 164 CIYCSICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEM 223
           C  C  C   CP +A+ + G K   R          SD+C  C  C   CP+    + + 
Sbjct: 4   CNDCGECVSQCPHHALSIDGGKVVWR----------SDVCEQCDTCLKMCPQQATPMAQT 53

Query: 224 VAV 226
           ++V
Sbjct: 54  MSV 56



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 203 CIGCGDCTDKCPRDLIVLN-EMVAVPPKGCPACGLCKAACPVDA 245
           C  CG+C  +CP   + ++   V      C  C  C   CP  A
Sbjct: 4   CNDCGECVSQCPHHALSIDGGKVVWRSDVCEQCDTCLKMCPQQA 47



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 12/69 (17%)

Query: 92  GFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALS 151
           G C  C +CV  CP   + ++G             + +  ++ C  C  C+  CP  A  
Sbjct: 2   GRCNDCGECVSQCPHHALSIDG------------GKVVWRSDVCEQCDTCLKMCPQQATP 49

Query: 152 IEGEKAVVD 160
           +    +V D
Sbjct: 50  MAQTMSVDD 58