Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 604 a.a., Uptake hydrogenase large subunit from Xanthobacter sp. DMC5

 Score = 81.3 bits (199), Expect = 9e-20
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 2/124 (1%)

Query: 3   KLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRICG 62
           ++ ++PVTR+EGH +  ++ D +  +          RG E  L+GR   DA  F  RICG
Sbjct: 17  RIVVDPVTRIEGHMRCEVNVDSNNIIRNAVSTGTMWRGLEVILKGRDPRDAWAFVERICG 76

Query: 63  ICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPDLMFPMTD 122
           +C   H L S RAV++   +KIP  A ++R +M +    H H +HF  L + D + P+  
Sbjct: 77  VCTGCHALTSVRAVEDALQIKIPNNAFLIREIMAKVLQWHDHVVHFYHLHALDWVNPV-- 134

Query: 123 DALK 126
           +ALK
Sbjct: 135 NALK 138



 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 23/184 (12%)

Query: 280 KGPVD-GVYRVNTLSRLNVCDRMPTPIAQKYYEEFVKTFGKPAHHPMLFHYARLIELISS 338
           KG VD  +   NTL+  N+  +   P           T G+     +  HY   + L   
Sbjct: 428 KGQVDEALGTFNTLAGTNLTAKQALPT----------TIGRTLARALEAHYCAKMMLDDF 477

Query: 339 AELIRKFLEDDAIVGTDIRVEPTDLVGE--GVGCLEAPRGTLVHHFKTDDKGIITDANLV 396
             LI      D       + +P     E  GVG + APRG L H  K  D G I +   V
Sbjct: 478 DHLIANIKAGDTSTANMEKWDPATWPKEAKGVGTVAAPRGGLGHWIKIKD-GRIENYQCV 536

Query: 397 VATVQN----NPAMDIGVQKVAEKYIKTPEDAKPHVLNHMEMVIRAYDPCLSCATHTI-- 450
           V T  N    +P  +IG  + +   + TP   +P     +   + ++DPCL+C+TH +  
Sbjct: 537 VPTTWNGGPRDPKGNIGAFEAS--LMNTPMQ-RPEEPVEILRTLHSFDPCLACSTHVMSD 593

Query: 451 DGKE 454
           DG E
Sbjct: 594 DGAE 597