Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 418 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score =  394 bits (1013), Expect = e-114
 Identities = 192/420 (45%), Positives = 285/420 (67%), Gaps = 3/420 (0%)

Query: 1   MTKLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRI 60
           M K++IEP++R+EGHGKV+++ DD+GK   V  H+  +RGFE+F+ GR  E+ P   PRI
Sbjct: 1   MGKVTIEPLSRLEGHGKVSITLDDAGKPTDVKLHITALRGFEQFVVGRPAEEVPRIVPRI 60

Query: 61  CGICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPDLMFPM 120
           CGICQ  H+LAS +AVD  +G ++P  A+ LR LM   + +HSHALHF  LA+PD +   
Sbjct: 61  CGICQTPHHLASVKAVDAAWGAEVPSAAEKLRELMHLGNMMHSHALHFYYLAAPDFVLGP 120

Query: 121 TDDALKRNVLGVASENMDVVKDAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPLTEEE 180
             D   RN++GV     +V K AI+MR++GQ+I++ +GGRAIHPVT V GG SK L+EE+
Sbjct: 121 DSDPAARNIIGVIGAAPEVAKKAIAMRRVGQSIVETIGGRAIHPVTGVPGGVSKALSEEK 180

Query: 181 RDELLKMSENLVDTAERTLVVGKQLLEGLKEQDLLE-LGYFESYHMGMVNNGAQDIYEGK 239
           RDELL   + ++   +  + + K L E  K  DL + LG  +++++GMV +G  + Y   
Sbjct: 181 RDELLNEIDEMIAYGQDGIALIKSLNE--KYMDLAKTLGVIDTWYLGMVKDGKHNFYGDT 238

Query: 240 IRVVNPEGKIEYEYEPSEYLNYMSEGVRPYSYLKFPYLTEKGPVDGVYRVNTLSRLNVCD 299
           +R ++P+GK   +++PSEYL+ + E V  ++Y+K+PY  + G  DG+YRV  L+ LNVCD
Sbjct: 239 LRFMSPDGKQTTDFKPSEYLDNIGEHVVGHNYVKYPYNKKVGYPDGLYRVGPLAMLNVCD 298

Query: 300 RMPTPIAQKYYEEFVKTFGKPAHHPMLFHYARLIELISSAELIRKFLEDDAIVGTDIRVE 359
            MPTP+A++  ++F  TFGKPA+  + +++ARLIEL++S E +++ LED  I  TDI+ E
Sbjct: 299 SMPTPLAEEARKDFADTFGKPANQSLAYNHARLIELLASCERVKELLEDSEITSTDIKAE 358

Query: 360 PTDLVGEGVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIGVQKVAEKYIK 419
                G GVG + APRGTL H+++TDDKGI+  AN++VA+  N P M+  +Q+ AE   K
Sbjct: 359 VEPKAGNGVGAIYAPRGTLFHNYETDDKGIVVKANMIVASTHNVPTMEKAIQQAAEVVFK 418