Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 496 a.a., Ni/Fe hydrogenase subunit alpha from Magnetospirillum magneticum AMB-1

 Score =  367 bits (943), Expect = e-106
 Identities = 196/458 (42%), Positives = 294/458 (64%), Gaps = 15/458 (3%)

Query: 1   MTKLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRI 60
           + ++ IEPV+RVEGHGKVT+  DD+ ++ +V  H+VE RGFEKF+EGR   + PV   R+
Sbjct: 16  LKRIVIEPVSRVEGHGKVTILLDDNNQVHQVRLHIVEFRGFEKFIEGRPYWEVPVLVQRL 75

Query: 61  CGICQVSHNLASARAVDNVF--GVKIPKTADMLRNLMQQASNVHSHALHFGMLASPDLMF 118
           CGIC VSH+LA+++A+D +   G+  P TA+ +R LM     + SHALHF  L+SPDL+F
Sbjct: 76  CGICPVSHHLAASKAMDMIVNGGILTP-TAEKIRRLMHYGQMLQSHALHFFHLSSPDLLF 134

Query: 119 PMTDDALKRNVLGVASENMDVVKDAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPLTE 178
               D  KRN++GVA+ N DV K  + +RK GQ +I+   G+ +H   +V GG +K LT 
Sbjct: 135 GFDSDVAKRNIVGVAAANPDVAKMGVLLRKFGQEVIRVTSGKRVHGTGSVPGGVNKSLTA 194

Query: 179 EERDELLKMSENLVDTAERTLVVGKQLLEGLKEQDLL---ELGYFESYHMGMVNN-GAQD 234
           EERD LLK S+ ++  +   +    ++++GL   +       G   S  M +V++ GA D
Sbjct: 195 EERDYLLKDSDQMIAWSRDAV----RIIKGLHRSNPALYDAFGAVPSTMMSLVDDKGALD 250

Query: 235 IYEGKIRVVNPEGKIEYEYEPSE-YLNYMSEGVRPYSYLKFPYLTEKGPVDGVYRVNTLS 293
            Y G +R  + +G++ ++    + Y   ++EGV+ +SY+KFPY+T  G   G Y+V  L+
Sbjct: 251 FYHGALRARDKDGEVIFDQVSYQGYNTLLTEGVKSWSYMKFPYITTLGEEKGWYKVGPLA 310

Query: 294 RLNVCDRMPTPIAQKYYEEFVKTFG-KPAHHPMLFHYARLIELISSAELIRKFLEDDAIV 352
           R+  CD +PTP A++   EFV   G KP H  + FH+AR+IE++ +AE I+  L D  I+
Sbjct: 311 RIQNCDSIPTPQAEEERVEFVAHGGAKPMHGSLGFHWARMIEMLCAAETIKDLLLDPDIM 370

Query: 353 GTDIRVEPTDLVGEGVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIGVQK 412
           G D+  E     GEG+G +EAPRGTL HH++ DD  ++T ANL+V+T  NN AM++ V+ 
Sbjct: 371 GADLMAEGPRR-GEGIGVIEAPRGTLFHHYRVDDNDLVTYANLIVSTTNNNTAMNVAVRD 429

Query: 413 VAEKYIKTPEDAKPHVLNHMEMVIRAYDPCLSCATHTI 450
           VA+ Y++  E  +  +LNH+E+ IR +DPCLSCATH +
Sbjct: 430 VAKNYLQGHEITE-GLLNHIEVAIRCFDPCLSCATHAL 466