Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 567 a.a., Uptake hydrogenase large subunit (EC 1.12.99.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 36/113 (31%), Positives = 64/113 (56%), Gaps = 1/113 (0%)

Query: 3   KLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRICG 62
           +++I+PVTR+EGH ++    ++ G + K        RG E+ ++ R   DA +   RICG
Sbjct: 4   RITIDPVTRIEGHLRIDCEIEN-GVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRICG 62

Query: 63  ICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPD 115
           +C  +H ++S RA ++   + +P  A  +RN++  A   H H +HF  L++ D
Sbjct: 63  VCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALD 115



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 366 EGVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIG--VQKVAEKYIKTP-- 421
           +GVG LEAPRG L H     D GII++   VV +  N+   +    V    +  + TP  
Sbjct: 470 KGVGFLEAPRGMLSHWMVIKD-GIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPIA 528

Query: 422 EDAKPHVLNHMEMV--IRAYDPCLSCATHTID 451
           + AKP     +E+V  I ++DPC++CA H +D
Sbjct: 529 DPAKP-----LEVVRTIHSFDPCMACAVHVVD 555