Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 567 a.a., hydrogenase 2, large subunit (NCBI) from Escherichia coli BW25113

 Score = 78.2 bits (191), Expect = 7e-19
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 1/113 (0%)

Query: 3   KLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRICG 62
           +++I+PVTR+EGH ++    ++ G + K        RG E+ ++ R   DA +   RICG
Sbjct: 4   RITIDPVTRIEGHLRIDCEIEN-GVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRICG 62

Query: 63  ICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPD 115
           +C  +H L+S RA ++   + +P  A  +RN++  A   H H +HF  L++ D
Sbjct: 63  VCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALD 115



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 366 EGVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIG--VQKVAEKYIKTPED 423
           +GVG LEAPRG L H     D GII++   VV +  N+   +    V    +  + TP  
Sbjct: 470 KGVGFLEAPRGMLSHWMVIKD-GIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPV- 527

Query: 424 AKPHVLNHMEMVIRAYDPCLSCATHTID 451
           A P+    +   I ++DPC++CA H +D
Sbjct: 528 ADPNKPLEVVRTIHSFDPCMACAVHVVD 555