Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 568 a.a., hydrogenase 2 large subunit from Dickeya dianthicola ME23

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 3   KLSIEPVTRVEGHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRICG 62
           +++I+P+TR+EGH ++    ++ GK+ K        RG E+ ++GR   DA +   RICG
Sbjct: 4   RITIDPITRIEGHLRIDCEIEN-GKVTKAWSSGTMWRGMEEIVKGRDPRDAWMIVQRICG 62

Query: 63  ICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGMLASPD 115
           +C   H +AS RAV+N  G+ +P  A  +RNL+  A ++H H +HF  L++ D
Sbjct: 63  VCTTVHAIASVRAVENALGLNVPVNAQYIRNLILAAHSIHDHIVHFYQLSALD 115



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 367 GVGCLEAPRGTLVHHFKTDDKGIITDANLVVATVQNNPAMDIGVQKVA---EKYIKTPED 423
           GVG  E PRG L  H+     G IT+   VV +   +   + G  K     +  + TP  
Sbjct: 471 GVGFGEMPRGML-SHWVVFKNGKITNYQAVVPSTWTSCPRN-GDDKPGPYEQSLVGTPV- 527

Query: 424 AKPHVLNHMEMVIRAYDPCLSCATHTID 451
           A PH    +   I ++DPC+SCA H +D
Sbjct: 528 ADPHKPLEVVRTIHSFDPCMSCAVHVVD 555