Pairwise Alignments

Query, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 575 a.a., hydrogenase large subunit from Dickeya dianthicola ME23

 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 39  RGFEKFLEGRY-IEDAPVFTPRICGICQVSHNLASARAVDNVFGVKIPKTADMLRNLMQQ 97
           RG EK  E R    +    + R+CGIC  +H++A   +++N  GV +P  A  +R+++ +
Sbjct: 224 RGMEKLAETRMGYNEVTFLSDRVCGICGFTHSVAYTSSIENALGVVVPARAHTIRSILLE 283

Query: 98  ASNVHSHALHFGM 110
              +HSH L+ G+
Sbjct: 284 VERLHSHLLNIGL 296



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 22/138 (15%)

Query: 331 RLIELISSAELIRKFLE---DDAIVGTDIRVEPTDLVGEGVGCLEAPRGTLVHHFKTDDK 387
           R+ E+ +S  +I   L+   D  I+   I  +P       +G  EAPRG  +H   T D 
Sbjct: 440 RVREVFTSLAMIEFGLDNMPDGPILNEHINYQPHKFA---LGFTEAPRGEDIHWSMTGDN 496

Query: 388 GIITDANLVVATVQNNPAMDIGVQKVAEKYIKTPEDAKPHVLNHMEMVIRAYDPCLSCAT 447
             +       AT  N P +   +              + + ++   ++I + DPC SC  
Sbjct: 497 QKLFRWRCRAATYANWPVLRFML--------------RGNTISDAPLIIGSLDPCYSCTD 542

Query: 448 HT--IDGKERMLSMDVYK 463
               +D +++ ++   YK
Sbjct: 543 RVTLVDVRKKKVTTVPYK 560