Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 414 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score =  392 bits (1007), Expect = e-113
 Identities = 214/411 (52%), Positives = 261/411 (63%), Gaps = 10/411 (2%)

Query: 1   MGKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVS 60
           + + V I+PTTRHEGH KLVL VDD+GIV K  Y + TPVRGFE  L GK A F PIAV 
Sbjct: 1   VAEPVTISPTTRHEGHAKLVLNVDDEGIVTKAFYPNTTPVRGFETMLQGKTAAFGPIAVM 60

Query: 61  RFCGICPIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEFLIAPDFIPE 120
           R CGIC   H  +S EAIE+A  +  PKDG++LREL GLGN+MHSHPLH  LI  DF+  
Sbjct: 61  RICGICQATHGIASCEAIENAIDMEIPKDGMILRELLGLGNRMHSHPLHHLLIVDDFLKP 120

Query: 121 AD----RVEYIKRIQEMRKTGQFIVDTIGGEAIHAPNIKVGGMLKNITENAASKIYYKCR 176
            +    RVE IK IQ+MRK GQ +VD  GGE IH PN+ VGGM  NITE A SK+YY CR
Sbjct: 121 EEAGTLRVEGIKLIQKMRKAGQMVVDITGGEGIHPPNLMVGGMRTNITERAKSKLYYACR 180

Query: 177 EYEKLAKEHVEYLIPIFESNMLADGTEIPEKLGYHDFGYIATDATYGNRENIDQSKVVEY 236
           EYEK     +E L  + E  +  D   IP+ LG H+  YIATD+T+GNR+ I+   V E 
Sbjct: 181 EYEKDCNAMLEVLEMLMERYL--DEIGIPD-LGKHNLPYIATDSTFGNRDAINWKDVTEV 237

Query: 237 TPYDVYE--KDVAVQACTTIPRYNGRLMEVGPRARFAKFHDFKNK-GAMAIHIARAYENV 293
                Y    D+A  A   IP Y G   E GPRAR  K+ +FK   GAM +++ARA EN 
Sbjct: 238 PAQRYYADFPDIAQTATNQIPFYRGNPAEGGPRARMIKYGNFKPAGGAMDLNLARAMENF 297

Query: 294 VHVKRAMEIIDELDVNGKTRSNEPILGDGEKIGLGVHEAARGHNTHQAAIDAKGRITYYN 353
             VKR++E+IDEL++NG  R         E+ G+GVHEA R  NTH A +   GRI  YN
Sbjct: 298 EAVKRSLELIDELNINGTVREVPNFYNAKEEFGIGVHEAPRATNTHMAKMGKDGRIEKYN 357

Query: 354 AIVATTWNIPLIGKATEGTHYKFAEHVVRAYDPCVSCATHVIAMDYDNKIV 404
            I A+TWN P + KA EG H+++AE ++RAYD   SCATHVI  D   K V
Sbjct: 358 IIAASTWNFPAVEKAIEGYHHQYAEVIMRAYDI*ASCATHVIVKDEQTKKV 408