Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 571 a.a., hydrogenase 4 catalytic subunit HyfG from Escherichia coli ECRC98

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 86/402 (21%), Positives = 150/402 (37%), Gaps = 62/402 (15%)

Query: 10  TTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVS-RFCGICPI 68
           T+   GH +L   VD + IV+  +Y      RG EK    ++       +S R CGIC  
Sbjct: 192 TSDEPGHFRLF--VDGEQIVD-ADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGF 248

Query: 69  AHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEFLIAPDFIPEADRVEYIK 128
           AH+ +   ++E+A GI  P+    +R +     ++HSH L+   ++  F+          
Sbjct: 249 AHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLN-LGLSCHFVGFDTGFMQFF 307

Query: 129 RIQEMRKTGQFIVDTIGGEAIHAPNIKVGGMLKNITENAASKIYYKCREYEKLAKEHVEY 188
           R++E   T   ++   G    +  N+ +GG+ ++I +    +     RE      E VE 
Sbjct: 308 RVREKSMTMAELL--TGSRKTYGLNL-IGGVRRDILKEQRLQTLKLVREMRADVSELVEM 364

Query: 189 LIPIFESNMLADGTEIPEKLGYHDFGYIATDATYGNRENIDQSKVVEYTPYDVYEKDVAV 248
           L+          G  I                       +D+    +Y+P          
Sbjct: 365 LLATPNMEQRTQGIGI-----------------------LDRQIARDYSPV--------- 392

Query: 249 QACTTIPRYNGRLMEVGPRARFAKF-HDFKNKGAMAIHI-----ARAYENV-VHVKRAME 301
                     G L+     AR  +F H + + G +   +        +  V V VK   +
Sbjct: 393 ----------GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFD 442

Query: 302 IIDELDVNGKTRSNEPILGDG-----EKIGLGVHEAARGHNTHQAAIDAKGRITYYNAIV 356
            +  L+       + P+L +G         LG  EA RG + H + +    ++  +    
Sbjct: 443 SLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRA 502

Query: 357 ATTWNIPLIGKATEGTHYKFAEHVVRAYDPCVSCATHVIAMD 398
           AT  N P++     G     A  ++ + DPC SC   V  +D
Sbjct: 503 ATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVD 544