Pairwise Alignments

Query, 410 a.a., coenzyme F420 hydrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 568 a.a., hydrogenase 2 large subunit from Dickeya dianthicola ME23

 Score = 67.8 bits (164), Expect = 8e-16
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 1   MGKTVEINPTTRHEGHTKLVLKVDDDGIVEKGNYLSVTPVRGFEKFLVGKVAEFAPIAVS 60
           M + + I+P TR EGH ++  ++++  + +   + S T  RG E+ + G+    A + V 
Sbjct: 1   MSQRITIDPITRIEGHLRIDCEIENGKVTKA--WSSGTMWRGMEEIVKGRDPRDAWMIVQ 58

Query: 61  RFCGICPIAHATSSVEAIEDACGITPPKDGLLLRELTGLGNKMHSHPLHEFLIA 114
           R CG+C   HA +SV A+E+A G+  P +   +R L    + +H H +H + ++
Sbjct: 59  RICGVCTTVHAIASVRAVENALGLNVPVNAQYIRNLILAAHSIHDHIVHFYQLS 112



 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 16/104 (15%)

Query: 321 DGEKIGLGVHEAARGHNTHQAAIDAKGRITYYNAIVATTWNI--------------PLIG 366
           D E  G+G  E  RG  +H       G+IT Y A+V +TW                 L+G
Sbjct: 466 DTEFHGVGFGEMPRGMLSHWVVFK-NGKITNYQAVVPSTWTSCPRNGDDKPGPYEQSLVG 524

Query: 367 KATEGTHYKF-AEHVVRAYDPCVSCATHVIAMDYDNKIVDKKII 409
                 H        + ++DPC+SCA HV+     N++   K++
Sbjct: 525 TPVADPHKPLEVVRTIHSFDPCMSCAVHVVDTVNGNEVTRVKVL 568



 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 88  KDGLLLRELTGLGNKMHSHPLHEFLIAPDFIPEADRVEYIKRIQ--EMRKTGQFIVDTIG 145
           KD +   +L    N    HP      A    PE + +     +Q  E ++    IV  +G
Sbjct: 156 KDLVASGQLGIFANGYWGHP------AMSLPPEVNLIAVAHYLQALECQRDANRIVAILG 209

Query: 146 GEAIHAPNIKVGGMLKNITENAASKIYYKCREYEK 180
           G++ H  N+ VGG+   I  +A S +  +   Y K
Sbjct: 210 GKSPHIQNLAVGGVANPINLDAPSVLNLERLMYVK 244