Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 188 a.a., NADH-quinone oxidoreductase subunit NuoB from Magnetospirillum magneticum AMB-1

 Score = 41.2 bits (95), Expect = 1e-08
 Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 56  LIERKIPENIDIALVEGSVCLDDHHSVEDILTTRKNSKIVVALGACAASGGVTRFGRGGQ 115
           ++ R  P   D+ +V G++      ++  +       + V+++G+CA  GG   +     
Sbjct: 87  VVFRPSPRQSDLMIVAGTLTNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHY----- 141

Query: 116 MSQPSHSSFVPIGDVIKVDLALPGCPPSTESIV 148
               S+S       ++ VD+ +PGCPPS E+++
Sbjct: 142 ----SYSVVRGCDRIVPVDIYVPGCPPSAEALM 170