Pairwise Alignments

Query, 242 a.a., coenzyme F420 hydrogenase subunit gamma from Methanococcus maripaludis S2

Subject, 220 a.a., NADH-quinone oxidoreductase subunit NuoB from Escherichia coli ECRC62

 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 59  RKIPENIDIALVEGSVCLDDHHSVEDILTTRKNSKIVVALGACAASGGVTRFGRGGQMSQ 118
           R  P   D+ +V G+        ++ +       K V+++GACA SGG+           
Sbjct: 87  RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-------- 138

Query: 119 PSHSSFVPIGDVIKVDLALPGCPPSTESIVNLIM 152
             +S    +   I VD+ +PGCPP  E+ +  +M
Sbjct: 139 --YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170