Pairwise Alignments

Query, 412 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2

 Score =  209 bits (531), Expect = 4e-58
 Identities = 146/406 (35%), Positives = 213/406 (52%), Gaps = 68/406 (16%)

Query: 12   LSMLVSANATDIQYNWTINESGTYTLSEDMLVNYYGIQITASNVVLDGNNNKLISNNSEG 71
            ++  V  N+ +I  N      G Y  +   ++N+          V + N +K+ + N   
Sbjct: 681  ITFRVDLNSPEITINLI---EGEYLNNGSNVINF---------TVNESNLDKVTAFNGS- 727

Query: 72   TGIYIRSNYENYTENVTIKNLNIENWSIGIKIDGDVKNITIKNCEFENNE----YFLKSY 127
            T I + ++  NY  +V    LN   +++ I+I+    NI  K+  F  +       L + 
Sbjct: 728  TEIALENSTGNYLNSVA---LNEGVYNVTIRINDTAGNIAEKSLNFIIDTTAPVLTLNNP 784

Query: 128  ATEQYFYLNTIHENQEVMSNSPLASPKLVYNYGGNEYTYRL---GNYYVGYTGTEAEDEG 184
                 F  +++  N  V +N  L++   V    G+     L   GNYY G TGT +    
Sbjct: 785  VNGTTFTTSSVSLN--VSANDSLSNVSSVTAKIGSVRNVTLFFDGNYYTGNTGTLSNG-- 840

Query: 185  VYNFVHNEEESFIRAFDIYPLIKTPENYKILKVLYPESDSENGVVVADIFALANYPENYV 244
                                      NY+I             ++  D+    N  E   
Sbjct: 841  --------------------------NYEIR------------IIATDLVGNVNSNETVN 862

Query: 245  IKETPVTTPSPSHSSSGGRSYDSDISNDIESKVIKNFVSSAAVIYGNEIDQQYAEELRER 304
            I    +  P+ + S S G  Y SD+S+ I S VIKN VS++ ++YG+EID +YA +L+E 
Sbjct: 863  IT---IKVPASTSSGSSGSHYSSDLSDGITSSVIKNTVSNSNIVYGSEIDGKYAGKLKEN 919

Query: 305  IQNAEGFKISGNSVIVGGPNANGFAKEYNNQFEMPISNDYPGENKGVIQVLKVHGSSINI 364
            + N+E ++ISG+++IVGGP  N  A +Y+++F + ISNDYPGEN G+IQVLKV  ++ NI
Sbjct: 920  LYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISNDYPGENNGIIQVLKVQDNTGNI 979

Query: 365  IQSYTIVYIAGSDRLGTQAALEYFKTLDELPNGPIMVEWTENGPVV 410
            I+SY IVYIAGSDRLGTQAALEYFKTL+ELP GPIMVEWTENGPV+
Sbjct: 980  IKSYKIVYIAGSDRLGTQAALEYFKTLNELPEGPIMVEWTENGPVL 1025