Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 1026 a.a., SBBP repeat-containing protein from Methanococcus maripaludis S2

 Score =  227 bits (579), Expect = 2e-63
 Identities = 176/544 (32%), Positives = 273/544 (50%), Gaps = 66/544 (12%)

Query: 181  NLNLISRLGSATYETMPPTNNYTIWGDYEAWLEAPQ---YRITGYE---ISSTNNTDVMK 234
            N +++   G+    T+  TN     G Y+  L  P    Y +T      + +TN T+ + 
Sbjct: 539  NFSIVDNFGNLVNSTVNETN-----GSYQITLSVPADGIYNVTATAFDMVGNTNTTEAIN 593

Query: 235  SWLNEGSVIIIAMRGEDIWTFDNNSILSDFDQSHDEADHAQAVIGYDDSISEDNETGAFK 294
              ++E + ++     E   +++  SI+ +   +    D   A I   ++I+ +N +G F 
Sbjct: 594  VTVDENAPLVTINTLEK--SYNTTSIVINVTATDLNLDSVIAEINGTENITLENISGYF- 650

Query: 295  VMNSWGANWSPNGDGSYYITYKAMANLDYTTCYRITGAVYNTSESHPEL-IGVVKFDSDN 353
            V +++  +   N       T K  AN  +          +    + PE+ I +++ +  N
Sbjct: 651  VNSTYEFSEGSN-------TVKIYANDSFGHINSNENITFRVDLNSPEITINLIEGEYLN 703

Query: 354  KGTKDQNITFGIGNKSNISGSVDIYEGMDENGGNGSMPDFI-AVDLTDWKSEFENSLNNT 412
             G+   N T    N+SN+   V  + G  E     S  +++ +V L +        +N+T
Sbjct: 704  NGSNVINFTV---NESNLD-KVTAFNGSTEIALENSTGNYLNSVALNEGVYNVTIRINDT 759

Query: 413  GKGYYFANFSNGTKTSIISEFGIIKYSSYPNGEEINTLNSYACNNSTLFKFYSKTAPKLT 472
                   N +  +   II                + TLN+    N T F   + ++  L 
Sbjct: 760  A-----GNIAEKSLNFIIDTTA-----------PVLTLNNPV--NGTTF---TTSSVSLN 798

Query: 473  NSSIDILDSKVIVSIHADDVDDDLWGVKVYFDGLNEYYSLTRADQTFNTSFNKSMFTYGE 532
             S+ D L +   V+     V +    V ++FDG   YY+            N    + G 
Sbjct: 799  VSANDSLSNVSSVTAKIGSVRN----VTLFFDG--NYYT-----------GNTGTLSNGN 841

Query: 533  HYAIFEAFDGSGNTNKSEKVYFEILAPATTSR-STTSHYSSDLSDGIDSGTIKRAISNSN 591
            +     A D  GN N +E V   I  PA+TS  S+ SHYSSDLSDGI S  IK  +SNSN
Sbjct: 842  YEIRIIATDLVGNVNSNETVNITIKVPASTSSGSSGSHYSSDLSDGITSSVIKNTVSNSN 901

Query: 592  VIYGSDIDEEFALNLRENVQNGNNYELSKDTIIVGGPESNGFADKYNNEFEIQITNDYPG 651
            ++YGS+ID ++A  L+EN+ N  +YE+S DTIIVGGP+ N  A+KY+++F I I+NDYPG
Sbjct: 902  IVYGSEIDGKYAGKLKENLYNSEDYEISGDTIIVGGPKYNVLANKYDSKFGISISNDYPG 961

Query: 652  ENKGVIQIQTIEVRDGNIIKPYQVIYIAGSDRFGTLAALEYFKTLDELPKGPITVEWNDN 711
            EN G+IQ+  ++   GNIIK Y+++YIAGSDR GT AALEYFKTL+ELP+GPI VEW +N
Sbjct: 962  ENNGIIQVLKVQDNTGNIIKSYKIVYIAGSDRLGTQAALEYFKTLNELPEGPIMVEWTEN 1021

Query: 712  GIIV 715
            G ++
Sbjct: 1022 GPVL 1025