Pairwise Alignments

Query, 717 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 412 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score =  189 bits (480), Expect = 2e-52
 Identities = 123/340 (36%), Positives = 179/340 (52%), Gaps = 28/340 (8%)

Query: 402 KSEFENSLNN-TGKGYYFANFSNGTKTSIISEFGIIKYSSYPNGEEINTLNSYACNNSTL 460
           +S +EN   N T K     N+S G K     +   IK   + N E    L SYA      
Sbjct: 77  RSNYENYTENVTIKNLNIENWSIGIKIDGDVKNITIKNCEFENNEYF--LKSYATEQYFY 134

Query: 461 FKFYSKTAPKLTNSSIDILDSKVIVSIHADDVDDDLWGVKVYFDGLNE-----YYSLTRA 515
                +    ++NS +     K++ +   ++    L    V + G        Y  +   
Sbjct: 135 LNTIHENQEVMSNSPL--ASPKLVYNYGGNEYTYRLGNYYVGYTGTEAEDEGVYNFVHNE 192

Query: 516 DQTFNTSFN-KSMFTYGEHYAIFEAFDGSGNTNKSEKV------------YFEILAPATT 562
           +++F  +F+   +    E+Y I +      ++     V            Y     P TT
Sbjct: 193 EESFIRAFDIYPLIKTPENYKILKVLYPESDSENGVVVADIFALANYPENYVIKETPVTT 252

Query: 563 -----SRSTTSHYSSDLSDGIDSGTIKRAISNSNVIYGSDIDEEFALNLRENVQNGNNYE 617
                S S    Y SD+S+ I+S  IK  +S++ VIYG++ID+++A  LRE +QN   ++
Sbjct: 253 PSPSHSSSGGRSYDSDISNDIESKVIKNFVSSAAVIYGNEIDQQYAEELRERIQNAEGFK 312

Query: 618 LSKDTIIVGGPESNGFADKYNNEFEIQITNDYPGENKGVIQIQTIEVRDGNIIKPYQVIY 677
           +S +++IVGGP +NGFA +YNN+FE+ I+NDYPGENKGVIQ+  +     NII+ Y ++Y
Sbjct: 313 ISGNSVIVGGPNANGFAKEYNNQFEMPISNDYPGENKGVIQVLKVHGSSINIIQSYTIVY 372

Query: 678 IAGSDRFGTLAALEYFKTLDELPKGPITVEWNDNGIIVVE 717
           IAGSDR GT AALEYFKTLDELP GPI VEW +NG +VVE
Sbjct: 373 IAGSDRLGTQAALEYFKTLDELPNGPIMVEWTENGPVVVE 412