Pairwise Alignments

Query, 300 a.a., permease from Methanococcus maripaludis S2

Subject, 285 a.a., permease from Methanococcus maripaludis S2

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 64/282 (22%), Positives = 131/282 (46%), Gaps = 15/282 (5%)

Query: 20  FNQIAIYWVFGIVFGSIISVFGKNKIHKLFASIQNRRLGVFGMIPAGLLGIASPICMYGT 79
           F++  +Y +FG +  + I V  K K+ + F  I +       +I A L+G   P+C    
Sbjct: 18  FSEAFVYILFGFLMSAYIKVKLKGKLRQKFVHILDNSKK--SIIIASLIGAVLPLCSASG 75

Query: 80  IPIAASFSKSGMRDDWLAAFMMSSILLNPQLIIYSAALGETALAVRIISALACGVIAGLL 139
           IP+A   +  G       +F++S+  + P  ++ + +L      + ++  LA  V+A  L
Sbjct: 76  IPVANVMNSKGTNLGTTMSFIVSASSITPLGVMLTYSL--LGYEIAVMQILASLVLACSL 133

Query: 140 VKFLFNDRKFFNFSGFSEPTSRDNDPNVLLRLLKNIWRNIKATGHYFLIGILLSALFQHY 199
               +ND+  F F  + +  + +    VL + +KN+   I       +IG L+S    ++
Sbjct: 134 GIIFYNDKIPFYFEEY-DVKAEETFLKVLFKQMKNLMPAI-------MIGFLISGFMMYF 185

Query: 200 VSPDAFANLFGSQRGFGVLMAATIG-VPLYVCGGGTLPLLMAWLDSGMSMGAAAAFMITG 258
           +  D    L+       +   A++  + +++C    +PL+ +   +G+  G   +F+I+ 
Sbjct: 186 IPKDII--LYALSNNIMMYFYASVARIFIFLCPNAMIPLISSVAINGVPKGLILSFLISA 243

Query: 259 PATKITNLGAVKIVLGAKHFTAYVAFTIISAIIAGVVVNLMV 300
           P+  +  + A+  V G K    YV   II   I G++V++++
Sbjct: 244 PSIGLPMISAMLKVYGKKIALKYVFGVIILGGIIGILVDILL 285