Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 2e-28
 Identities = 83/372 (22%), Positives = 158/372 (42%), Gaps = 4/372 (1%)

Query: 23  MSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIGNKDR 82
           ++L A  +  +EF+ + LL  +A DL ++   AG  ++   +   I + F+        R
Sbjct: 8   LALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAKLPR 67

Query: 83  RHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSASSVPK 142
           +  L+    +  I  +L A A D  +LM  R +  +C G F+ + +     +V A+    
Sbjct: 68  KAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANKRAS 127

Query: 143 ALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPKLPKENSN 202
           A+A++  G  L+  +  P+G+ LG   GWR  F+ +  +  +A I   + +P       +
Sbjct: 128 AVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLP----AKRD 183

Query: 203 EQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVETLSLVLLS 262
           E+K    +    LK   + L +    LF      LFTY+ P L  VT V+ + ++  LL 
Sbjct: 184 EEKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLL 243

Query: 263 MGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLISIWGFLAT 322
           +G+   +G  I   +  KRL + +I +   MA+ +  +     ++    + + +W   + 
Sbjct: 244 IGLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATASF 303

Query: 323 SAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAGYQSTFMFSALIL 382
           +A  A    +             L +    +   LGA  GG         +    +A +L
Sbjct: 304 AAVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAVL 363

Query: 383 GIATIMACITGF 394
            I  ++  +  F
Sbjct: 364 AILALLVTLITF 375