Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 400 a.a., Uncharacterized MFS-type transporter YtbD from Variovorax sp. SCN45

 Score =  113 bits (283), Expect = 9e-30
 Identities = 97/386 (25%), Positives = 165/386 (42%), Gaps = 20/386 (5%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           A+ A++L A  +  +EF+ V L+  +A DL I   +AG  +S+  +   I +  LT + G
Sbjct: 4   ALLALTLSAFAIGTTEFVIVGLIPTVAADLHIGLPSAGLLVSLYALGVAIGAPVLTALTG 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
              R+ +LL   AL  +  +L   AP    L+  R L G+  G F+S+ +     +V   
Sbjct: 64  KLPRKALLLSLMALFTVGNLLAWQAPSYESLIAARVLTGLAHGVFFSIGSTIATGLVPKE 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPK--- 195
               A+AI+  G  ++     P+G+F+G   GWR  F  +  L  +AFI  +  +P    
Sbjct: 124 KAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWRETFLAVSALGVVAFIGSWVFVPSNIR 183

Query: 196 -LPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVE 254
             P  +  +Q +       LL   K A+G       + G    FT+L P L  V+  +  
Sbjct: 184 HTPPASLAQQAKVLAEPRLLLVYAKTAIG-------YGGSFIPFTFLAPILTEVSGFSAG 236

Query: 255 TLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTS---LAAVF 311
            +  V+L  G+   +G      +  +R     + I F +    +L+ +F      LA + 
Sbjct: 237 AVGWVMLVYGVSVAVGNIWGGKLADRRGPIPALKIIFALLAAVLLLFNFAAPHKWLALLA 296

Query: 312 VLISIWGFLATSAPVAWWTWL----SRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFD 367
           VL  +WG +A         ++     R  P   +   GL +A   L I   A  GG+   
Sbjct: 297 VL--MWGAVAFGNVPGLQVYVVKQAERFTPQAVDVASGLNIAAFNLGIAGAAWAGGLIVT 354

Query: 368 TAGYQSTFMFSALILGIATIMACITG 393
             G   T    AL++ ++  +   +G
Sbjct: 355 HLGLMHTPWIGALVVLVSLALTQWSG 380