Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 391 a.a., Putative drug efflux protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (289), Expect = 2e-30
 Identities = 94/383 (24%), Positives = 171/383 (44%), Gaps = 14/383 (3%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           A++A+++ A  +  +EF+ V L+  IA  L I+  +AG  +SI  +   I +  LT + G
Sbjct: 4   ALFALTISAFAIGTTEFVIVGLVPTIAQQLAISLPSAGMLVSIYALGVAIGAPVLTALTG 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
              R+ +L+    L     +L   AP    L++ R L G+  G F+S+ +     +V   
Sbjct: 64  RLPRKQLLVALMVLFTAGNLLAWQAPGYMTLIVARLLTGLAHGVFFSIGSTIATSLVPKE 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIP-KLP 197
               A+AI+ GG  ++     P+G+F+G   GWR  F  +  L  IA +     IP  +P
Sbjct: 124 KAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSLLGVIALMSSQLLIPANIP 183

Query: 198 KENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVETLS 257
              +   +++      +L + ++ L      L + G    FT+L P ++ +   +   +S
Sbjct: 184 GRAAASIRDQ----VKVLTHPRLLLIYAVTALGYGGVFTAFTFLAPMMQDLAGFSPAAVS 239

Query: 258 LVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSF----GTSLAAVFVL 313
            +LL  G+   IG      +  K  +  +  + F+ A   VL++ F     T  AA+  +
Sbjct: 240 WILLGYGVSVAIGNIWGGKLADK--HGAVPALKFIFAALFVLLMVFQVTASTQYAALATI 297

Query: 314 ISIWGFLATSAP---VAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAG 370
           + +  F   + P   V       +  P   +   GL +A   + I LG+  GG   +  G
Sbjct: 298 LVMGVFAFGNVPGLQVYVVQKAEQFTPNAVDVASGLNIAAFNIGIALGSVIGGQTVEHYG 357

Query: 371 YQSTFMFSALILGIATIMACITG 393
              T    ALI+ +A ++  ++G
Sbjct: 358 LAQTPWIGALIVLVAFLLMGVSG 380