Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 396 a.a., predicted transporter (RefSeq) from Escherichia coli BW25113

 Score =  295 bits (755), Expect = 2e-84
 Identities = 152/389 (39%), Positives = 236/389 (60%), Gaps = 11/389 (2%)

Query: 7   NQIINDNKSA-------WGAIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSI 59
           ++ I +N+ A       W A+++++ C   L+  EF+PVSLLTP+A DL I+EG AGQS+
Sbjct: 2   SEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSV 61

Query: 60  SISGVFALITSLFLTQIIGNKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMC 119
           +++   A+  SLF+TQ I   DRR+V++ F  L  +S +LV+FA   ++L+IGRA LG+ 
Sbjct: 62  TVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA 121

Query: 120 IGGFWSMSAATVMRIVSASSVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIV 179
           +GGFW+MSA+  MR+V   +VPKAL+++ G  +++  +AAP+GSFLG +IGWR  F    
Sbjct: 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAA 181

Query: 180 PLAFIAFIWQYKSIPKLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFT 239
            +  +   W  KS+P LP E S++++    + F LL+   V  GMI++ + F GQ A FT
Sbjct: 182 VMGVLCIFWIIKSLPSLPGEPSHQKQ----NTFRLLQRPGVMAGMIAIFMSFAGQFAFFT 237

Query: 240 YLRPFLEMVTKVNVETLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVL 299
           Y+RP    +    V+ L+LVLLS GI   IGT +   +LK+ +   +   P ++A++A++
Sbjct: 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALV 297

Query: 300 MLSFGTSLAAVFVLISIWGFLATSAPVAWWTWLSRILPTRAEAGGGLMVAIIQLAITLGA 359
           +  +G+       +  IWG      PV W TW++R L  +AE  G + VA+IQLA T GA
Sbjct: 298 LTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGA 357

Query: 360 AFGGVFFDTAGYQSTFMFSALILGIATIM 388
           A GG   D  G  S  M S  ++ +  ++
Sbjct: 358 AIGGYALDNIGLTSPLMLSGTLMLLTALL 386