Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 389 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  118 bits (296), Expect = 3e-31
 Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 21/376 (5%)

Query: 22  AMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIGNKD 81
           A+++ A  +  +EF P+ LL  IA  + ++   AG  IS   V  ++ +  +T ++ ++ 
Sbjct: 9   ALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRA 68

Query: 82  RRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSASSVP 141
           RR  L+F  A+  +  VL A APD   LM+ R L  +  G F+ + +     +V      
Sbjct: 69  RRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQA 128

Query: 142 KALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIPKLPKENS 201
            A+A +  G  L+     P  ++LG  IGWR +F     L  I+ +  + S+PK      
Sbjct: 129 SAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGAR 188

Query: 202 NEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVETLSLVLL 261
            E K++      +L   +V   +++ +L       L+TY+ P L+ +T      ++ +L+
Sbjct: 189 PEVKKE----LAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLV 244

Query: 262 SMGIFGLIGTFIIEIMLKKRLYS-----LIIIIPFLMAITAVLMLSFGTSLAAVFVLISI 316
            +G+   IG ++   +  + +       L++++  ++AI  +    FG +++ V     +
Sbjct: 245 LIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMV-----V 299

Query: 317 WGFLATSAPVAWWTWLSRILPTRAEAGG---GLMVAIIQLAITLGAAFGGVFFDTA-GYQ 372
           WG  AT A V       R++   +EA G    + +    L   LGAA GG       GY 
Sbjct: 300 WG-AATFAVVP--PLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYS 356

Query: 373 STFMFSALILGIATIM 388
              +  A++ G+A ++
Sbjct: 357 FVPVMGAIVAGLALLL 372