Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 391 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  119 bits (298), Expect = 2e-31
 Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 14/383 (3%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           A+ A+++ A  +  +EF+ V L+  IA  L I+  +AG  +SI  +   + +  LT + G
Sbjct: 4   ALLALTISAFAIGTTEFVIVGLVPTIANQLAISLPSAGLLVSIYALGVAVGAPVLTALTG 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
              R+ +L+    L     VL   APD T L+I R L G+  G F+S+ +     +V   
Sbjct: 64  RFPRKQLLVALMVLFTAGNVLAWQAPDYTTLVIARLLTGLAHGVFFSIGSTIATSLVPKE 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIP-KLP 197
               A+AI+ GG  ++     P+G+F+G   GWR  F  +  L  IA +     +P  +P
Sbjct: 124 KAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSLLGVIALVTSLLLVPSNIP 183

Query: 198 KENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVETLS 257
              S   +++      +L + ++ +      L + G    FT+L P ++ +   +   +S
Sbjct: 184 GRASASLRDQ----LKVLTHPRLLIIYAVTALGYGGVFTAFTFLAPMMQDLAGFSPNAVS 239

Query: 258 LVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLA---AVFVLI 314
            +LL  GI   IG      +  K  +  +  + F+ A   VL++ F  + +   A  V +
Sbjct: 240 WILLGYGISVAIGNIWGGKLADK--HGAVPALKFIFAALVVLLMIFQFTASVHYAALVTV 297

Query: 315 SIWGFLATSAPVAWWTWLSR----ILPTRAEAGGGLMVAIIQLAITLGAAFGGVFFDTAG 370
            + G  A         ++ +      P   +   GL +A   + I LG+  GG      G
Sbjct: 298 LVMGIFAFGNVPGLQVYVVQKAELYTPNAVDVASGLNIAAFNIGIALGSIIGGQTVAHVG 357

Query: 371 YQSTFMFSALILGIATIMACITG 393
              T    A+I+ +A ++  ++G
Sbjct: 358 LTQTPWIGAVIVLVAFLLIGLSG 380