Pairwise Alignments

Query, 404 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 393 a.a., chloramphenicol resistance protein from Agrobacterium fabrum C58

 Score =  123 bits (308), Expect = 1e-32
 Identities = 98/384 (25%), Positives = 172/384 (44%), Gaps = 16/384 (4%)

Query: 19  AIWAMSLCAMVLVASEFMPVSLLTPIATDLQITEGTAGQSISISGVFALITSLFLTQIIG 78
           AI+A+++ A  +  +EF+ V LL  +A DL IT   AG  +S+  +     +  LT + G
Sbjct: 4   AIFALTIAAYAIGTTEFVIVGLLPTVANDLHITLPLAGLIVSVYALGVTFGAPILTALTG 63

Query: 79  NKDRRHVLLFFTALTGISGVLVAFAPDSTMLMIGRALLGMCIGGFWSMSAATVMRIVSAS 138
             +R+ +LL   AL  +     A +P   ML++ R +     G F+S+ A     +V  +
Sbjct: 64  RIERKPLLLGLMALFIVGNTAAALSPSYEMLLVARVIAAFAHGVFFSVGATIAADLVPEN 123

Query: 139 SVPKALAILNGGTALSTTVAAPMGSFLGGIIGWRGAFFMIVPLAFIAFIWQYKSIP---- 194
               A+A++  G  ++     P+G+++G I GWR  F+ +  L  +AF+     +P    
Sbjct: 124 RRASAIAMMFMGLTVAIVTGVPIGTYIGQIFGWRATFWAVGALGIVAFVAIAVLLPNTLK 183

Query: 195 KLPKENSNEQKEKFGSVFGLLKNWKVALGMISVMLFFMGQSALFTYLRPFLEMVTKVNVE 254
           K P  +  +Q    GS   L+     ALG       + G    FT+L P L+ VT  +  
Sbjct: 184 KAPPASIFDQVRVLGSGRLLIVFAMTALG-------YGGTFVAFTFLAPILQDVTGFSES 236

Query: 255 TLSLVLLSMGIFGLIGTFIIEIMLKKRLYSLIIIIPFLMAITAVLMLSFGTSLAAVFVLI 314
           ++SL+L+  GI    G      +        +I +  L AI  V+      S     + +
Sbjct: 237 SVSLILVLYGIAIAAGNIGGGKIANHNPVKALIGLFALQAIVLVIFSFTAVSPVLTLITL 296

Query: 315 SIWGFLATSAPVAWWTWLSRIL----PTRAEAGGGLMVAIIQLAITLGAAFGGVFFDT-A 369
              GFL+ +       ++ ++     P   +    L +A   L I LGA  GGV  ++  
Sbjct: 297 VALGFLSFANVPGLQLYVVQLAKEHRPGAVDVASALNIAAFNLGIALGAWLGGVVVESPM 356

Query: 370 GYQSTFMFSALILGIATIMACITG 393
           G  +T    A+++ +A ++   +G
Sbjct: 357 GLGATPWVGAILVAVALLLTIWSG 380