Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 9e-31
 Identities = 82/278 (29%), Positives = 150/278 (53%), Gaps = 13/278 (4%)

Query: 442 KVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEE--- 498
           +++  L+G  E+A Q+  AA +++      +  LQ  ++E+E       E+ +A +E   
Sbjct: 258 QLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQAATAVTEMSAAVDEVAG 317

Query: 499 ----TVKSSEEIKENSEIGVEKVENAISRMQSITNVIDE-LGKSIKM--LGEDGKKINEV 551
               + ++S+   E+S+ G  ++   IS   SI N++DE LG S K   L    + I++V
Sbjct: 318 NAVSSAEASQASDEDSKHGHYQISETIS---SIQNLVDEVLGASNKAEGLAVQAQDISKV 374

Query: 552 TGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGV 611
             +I+ IA QT LLALNA+IEAARAG+AG+GFAVVA E+++LA+  + S E+I   I G+
Sbjct: 375 LEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQDSTEEIEQMITGI 434

Query: 612 NSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENT 671
               + TV+      ++    +   +    AL KI  ++++ + +   I   A+  +   
Sbjct: 435 QQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRNLVIASAAEQQALVA 494

Query: 672 EGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEI 709
               ++  +I  LS +  A A + +A+++EL+ +  ++
Sbjct: 495 RDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDL 532