Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 3e-32
 Identities = 116/463 (25%), Positives = 204/463 (44%), Gaps = 106/463 (22%)

Query: 284 QTDAIAAKNDARNKIIMLALFGILIAFLITSYS-----NRKITKPIEELKKGTEEF--GN 336
           Q   + AK   R + ++L++ G+ +  L+   +        I +P+  +K   ++   G 
Sbjct: 189 QVAVVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGE 248

Query: 337 GNYDYKTTVKTGDELQELSDSFNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKG 396
           G+   +  + + DEL +L+ +FN+  + +  L++ +     +L  L++ VSD   R  + 
Sbjct: 249 GDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQ- 307

Query: 397 DFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQ 456
              A   +  E +++  AIN                                       Q
Sbjct: 308 ---AMERQRHETDQVATAIN---------------------------------------Q 325

Query: 457 VAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEK 516
           ++ AA +VA +A   S   Q++  E ++    AK V                        
Sbjct: 326 MSSAAQEVARSAQGASVAAQQTDAEGQA----AKRV------------------------ 357

Query: 517 VENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARA 576
           V+ +I+++ ++ N I   G S+  L +D   I  V  +I+ IAEQT LLALNA+IEAARA
Sbjct: 358 VDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARA 417

Query: 577 GDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAI 636
           G+AG+GFAVVA E++ALA   + S ++I   ID + +  E  V+   +  D  D      
Sbjct: 418 GEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQA 477

Query: 637 DEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVT 696
           +E   +L  + + +      IN +                NAQ IA+ +EE TA AEE+ 
Sbjct: 478 NEAGASLDTMAQLIG----TINSM----------------NAQ-IASAAEEQTAVAEEIN 516

Query: 697 ASTEEL----NSIIEEIRVIAE---ELTHVSERVSEKSNQFEI 732
            S  ++    +S+ +E ++ A+    L  + +R+ +   QF I
Sbjct: 517 RSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFRI 559