Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  122 bits (305), Expect = 6e-32
 Identities = 109/408 (26%), Positives = 181/408 (44%), Gaps = 42/408 (10%)

Query: 325 EELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNLMKTM----DMDKLELA 380
           E   +G +   NG+       ++    Q   D F+  A  V  LM  M     +    L 
Sbjct: 106 ENPPRGAQVLRNGDQQLAVLAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLIRFLL 165

Query: 381 NLLNNVSDVMNRVAK-GDFTARA-----DESREN----NKLEKAINTAVSNVADLIKELR 430
           + LN + DVM  V K GD +AR      DE  +     N ++   +  VS VA    +L 
Sbjct: 166 SQLNTLKDVMLHVEKTGDLSARVPLASGDEVGQMAGAFNAMQSTYHRVVSTVAHSAAQLD 225

Query: 431 EELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAK 490
                L   +  V   + G +    Q A A                    E+ +T  +  
Sbjct: 226 SGAARLAASMSDVRHGMLGQQSETDQAATAIN------------------EMSATVHHIA 267

Query: 491 EVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINE 550
           +   A  +  ++++ +  + +  V +V+++IS + S    + +  + I+ L ED +KIN 
Sbjct: 268 QHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSS---GVQQTAEMIRQLAEDSQKING 324

Query: 551 VTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDG 610
           V  +I  IAEQT LLALNA+IEAARAGD G+GFAVVA E++ LA+ ++ S ++I   +  
Sbjct: 325 VVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMVSA 384

Query: 611 VNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESV---NESAIKINGIKHGAQNA 667
           + S   D V+   +   + D  V    E  +AL +I  +V    ES  +I          
Sbjct: 385 LQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQV 444

Query: 668 SENTEGALKNAQDIAALSEEFT----ATAEEVTASTEELNSIIEEIRV 711
           +E    A+ + +D+   + + T     T+ E+     ELN  I ++++
Sbjct: 445 AEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLKL 492



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 57/295 (19%), Positives = 121/295 (41%), Gaps = 30/295 (10%)

Query: 439 QIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEE 498
           Q+  ++D +   E+T     + + +V  A+ D+  ++  +   ++STY     V S    
Sbjct: 167 QLNTLKDVMLHVEKTG----DLSARVPLASGDEVGQMAGAFNAMQSTYHR---VVSTVAH 219

Query: 499 TVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDI 558
           +    +         +  V + +   QS T   D+   +I  +      I +  G  +D+
Sbjct: 220 SAAQLDSGAARLAASMSDVRHGMLGQQSET---DQAATAINEMSATVHHIAQHAGATRDL 276

Query: 559 AEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED---INHTIDGVNSRI 615
           ++    LA +     +R  D+  G   ++S ++  AE I++  ED   IN  +  ++S  
Sbjct: 277 SQTADTLAGSGQAVVSRVQDSISG---LSSGVQQTAEMIRQLAEDSQKINGVVSVIHSIA 333

Query: 616 EDTVDLGLKGKDEVDKG-------VIAIDEVNDALLKIKESVNESAIKINGIKHGAQNAS 668
           E T  L L    E  +         +  DEV +   +++ S +E    ++ ++ G ++A 
Sbjct: 334 EQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQSGTRDAV 393

Query: 669 E-------NTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEEL 716
           E         +  ++ AQ+      E T    ++  S  ++    E+   +AEE+
Sbjct: 394 EFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVAEEM 448