Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  124 bits (312), Expect = 9e-33
 Identities = 98/383 (25%), Positives = 184/383 (48%), Gaps = 28/383 (7%)

Query: 340 DYKTTVK-TGDELQELSDSFN-------KMAENVKNLMKTMDMDKLELANLLNNVSDVMN 391
           D KT V  +G +L  L+D +N       + AE+  +  +TM    + LA L        +
Sbjct: 151 DMKTVVDGSGAQLNALADYYNAQINEQGQAAESQYSRSRTMVFGFVILAGL--------S 202

Query: 392 RVAKGDFTARADESRENNKLEKAINTAVSNVADLIKEL-REELDLLNIQIQKVEDELKGA 450
            +A      R+        +  A N A  ++   ++    +E+  L + +  ++  L+  
Sbjct: 203 TIALAWLLTRSIVRPLGQAMRAAENVARGDLTQTVEVSGNDEVTRLLVALHSMQGSLRST 262

Query: 451 ----EETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEI 506
                ++A Q+A +AT +       S  LQ+ + E+E       E+ SAAEE  +++   
Sbjct: 263 LQLIRQSAAQMAASATDLNGITDQSSRSLQQQTAEIEQAATAVNEMTSAAEEVARNAVST 322

Query: 507 KENSEI-------GVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIA 559
            E++ +       G  +V   +S +Q++++ I E    ++ L E  + I +V  +I+ IA
Sbjct: 323 SESTRLSNETAREGQHRVGETVSAIQALSSNIGETSTLVQSLAEQSRDIGKVLDVIRSIA 382

Query: 560 EQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTV 619
           EQT LLALNA+IEAARAG++G+GFAVVA E++ALA   ++S  +I+  +  + +   D +
Sbjct: 383 EQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDQMVTAMRTGSNDAL 442

Query: 620 DLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQ 679
                        +   +    AL +I +S+++   +   I   A+  ++  +   +N  
Sbjct: 443 TSMQSSTQRAGDTLTLAEGAGGALSQITDSIDQIHQRNLVIASAAEEQAQVAKEVDRNIV 502

Query: 680 DIAALSEEFTATAEEVTASTEEL 702
           +I  LS + ++ A  +  S++EL
Sbjct: 503 NIRDLSAQSSSGAGRINGSSQEL 525



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 16/88 (18%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 641 DALLKIKESVNESAIKINGIKHGAQNASENTEGALK-NAQDIAALSEEFTATAEEVTAST 699
           D    ++ S N+   ++    H  Q +  +T   ++ +A  +AA + +     ++ + S 
Sbjct: 232 DLTQTVEVSGNDEVTRLLVALHSMQGSLRSTLQLIRQSAAQMAASATDLNGITDQSSRSL 291

Query: 700 EELNSIIEEIRVIAEELTHVSERVSEKS 727
           ++  + IE+      E+T  +E V+  +
Sbjct: 292 QQQTAEIEQAATAVNEMTSAAEEVARNA 319