Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 698 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  128 bits (321), Expect = 1e-33
 Identities = 120/416 (28%), Positives = 189/416 (45%), Gaps = 68/416 (16%)

Query: 299 IMLALFGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTT-VKTGDELQELSDS 357
           + LAL G  IAF+I     R IT P+  +K   E+   GN   +   V  GDEL +++ +
Sbjct: 196 LALAL-GAAIAFVIA----RSITGPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKA 250

Query: 358 FNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINT 417
                E    L++  +M+  + A                   ARA+  R+   + +  NT
Sbjct: 251 VGVFKEG---LLRVKEMEAEQEAQ-----------------KARAEAERKA-AMRQLANT 289

Query: 418 AVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQE 477
              +V  +I+ +                        ATQ+  ++TQ+A  A++ SA+   
Sbjct: 290 FEGSVGKVIQTVTS---------------------AATQLQVSSTQMASTAAETSAQATT 328

Query: 478 SSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQ---SITNVIDEL 534
            +   +    N + V +A EE   S  EI +     VE+ ++  SR Q   + TNV    
Sbjct: 329 VASASQQASANVETVAAATEELSSSITEIAKQ----VERSQSVASRAQDEAANTNV---- 380

Query: 535 GKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALA 594
              I+ L E+  KI E+  LI DIA QT LLALNA+IEAARAGDAGKGFAVVA+E+K LA
Sbjct: 381 --QIRALSENANKIGEIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKHLA 438

Query: 595 EEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESA 654
            +  K+ E+I   I  V    +D  +  +   D + K    I E+ +    +  +V E A
Sbjct: 439 TQTGKATEEIASQIRAV----QDGTNNAVHAIDGITK---VISEMGEISASVASAVEEQA 491

Query: 655 IKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIR 710
                I    + A+  T     +   +   + +  A AE++ ++  +L+   E +R
Sbjct: 492 AATQEIARNVEQAAAGTAEVSSSVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLR 547