Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 570 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  171 bits (433), Expect = 9e-47
 Identities = 146/553 (26%), Positives = 246/553 (44%), Gaps = 76/553 (13%)

Query: 183 GSIIIID-ILNNNNEIVDQVKADTGDEATFSLGKQRISTSLIE-NGKRPVGTSISDEV-W 239
           G I+  D +LN N ++VD++KA  G  AT  +G  R++T++I+ +G R VGT ++    +
Sbjct: 82  GKILAGDHVLNGNFDVVDKIKALVGGSATVFMGDTRVTTNVIKPDGSRAVGTQLAKTAAY 141

Query: 240 TYVMSQNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTD-AIAAKNDARNKI 298
             V  +   ++G   +LG   +TAY P+LD   +VIG+++VG  + D  +AA+   +  +
Sbjct: 142 EAVFGRKTSFRGEVEILGEPYMTAYDPILDGAGNVIGVLYVGIKKADFLVAAERTLQLMV 201

Query: 299 IMLALFGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTT-VKTGDELQELSDS 357
            +  L G L   +  + + R +  P++       +  +GN D      +  DE+ E+  +
Sbjct: 202 GVTVLVGALSILVSWTIAKRNLATPLKRSILAMRDLADGNLDVAIRHTERRDEIGEMIRA 261

Query: 358 FNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINT 417
                EN           +LE                     A+A E    N+ ++AI  
Sbjct: 262 LEIFKEN------GQARHRLE--------------------AAQAAEQAARNRRQEAIER 295

Query: 418 AVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQE 477
             ++               N  +  V   L G  E+A  + ++A  +   A D S +   
Sbjct: 296 LTTD--------------FNSSVFAV---LNGVTESAHHLRDSAQSMTSVAEDTSRQSTV 338

Query: 478 SSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKS 537
            +   E    N + V +AAE+   S  EI         +V N+       +   + +   
Sbjct: 339 VAAAAEQASVNVETVAAAAEQLAASEHEI-------ARQVANSSEISHRASEEAERVNSI 391

Query: 538 IKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEI 597
           +  L E   +I +V  LI DIA QT LLALNA+IEAARAGDAGKGFAVVA+E+K LA + 
Sbjct: 392 VLSLSEATNRIGQVVTLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQT 451

Query: 598 KKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKI 657
            ++ EDI   I+ V +   D V               AI  +   +  I ES        
Sbjct: 452 ARATEDIVVQINSVQAVTRDAVS--------------AIGGIGHTISSISESA------- 490

Query: 658 NGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELT 717
           + I    +  +  T    +N Q+ ++ + E T++   V        S   ++   A+EL+
Sbjct: 491 SAIASAVEEQTAATAEIARNVQEASSGTREVTSSITLVNQGAATTGSAAHQLLGTADELS 550

Query: 718 HVSERVSEKSNQF 730
             SE+++ + ++F
Sbjct: 551 QQSEQLATEVSEF 563