Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 650 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  127 bits (320), Expect = 1e-33
 Identities = 131/466 (28%), Positives = 210/466 (45%), Gaps = 84/466 (18%)

Query: 259 ELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDA-RNKIIMLALF---GILIAFLITS 314
           E+ +AYA    A D +         Q DA   ++DA  N ++ L+ F   G  +AFLI S
Sbjct: 240 EMSSAYASFAPAFDKIADFAIAMGNQVDA---EDDAIHNLVVGLSTFIAIGATVAFLILS 296

Query: 315 YS-NRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDE--LQELSDSFNKMAENVKNLMKT 371
           +  +R I  P+            G     T +  GD   +   +D  +++AE        
Sbjct: 297 WVISRSIVLPVR-----------GITGVMTALAGGDRAIMVPYADGHDEIAE-------- 337

Query: 372 MDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELRE 431
                  +A  +    D + R  K +  ARA    +  +  K                RE
Sbjct: 338 -------MARSVQIFKDGLIRSEKLEDEARAAREEQLARSHK----------------RE 374

Query: 432 ELDL-LNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAK 490
            L    ++ I++V  +++GA E+    +      AE  S QS+ +  ++EE  S   N +
Sbjct: 375 LLTADFDVMIRRVIGKVEGAVESVHTTSTNLHAAAEQTSRQSSAVAAAAEEASS---NIQ 431

Query: 491 EVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINE 550
            V SAAEE   S++EI         +V++     Q   + +     +++ L    +KI E
Sbjct: 432 TVASAAEELGASTQEISR-------RVQDTTRITQDAVDGVHTADATVEGLSTAAQKIGE 484

Query: 551 VTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDG 610
           + GLI DIA QT LLALNA+IEAARAG+AGKGFAVVA E+K LA +  K+  +I   I G
Sbjct: 485 IVGLITDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLATQTAKATSEIAEQIGG 544

Query: 611 VNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASEN 670
           + S  ++               V AI  V  A+ ++ E V+  A  +       QNA+  
Sbjct: 545 IQSSTQN--------------AVAAIKAVGVAIGRVDEVVSSIAAAVE-----EQNAA-- 583

Query: 671 TEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEEL 716
           T+  ++N Q+ A  ++E T+   EV+++      +   +  +A+EL
Sbjct: 584 TQEIVRNVQEAANGNQEVTSNISEVSSAAHMTGEMASTMFKVADEL 629



 Score = 29.6 bits (65), Expect = 5e-04
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 656 KINGIKHGAQNASENTEGAL----KNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRV 711
           K+ G        S N   A     + +  +AA +EE ++  + V ++ EEL +  +EI  
Sbjct: 390 KVEGAVESVHTTSTNLHAAAEQTSRQSSAVAAAAEEASSNIQTVASAAEELGASTQEISR 449

Query: 712 IAEELTHVSE 721
             ++ T +++
Sbjct: 450 RVQDTTRITQ 459