Pairwise Alignments

Query, 258 a.a., serine protease from Methanococcus maripaludis S2

Subject, 485 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Xanthobacter sp. DMC5

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 49/171 (28%)

Query: 31  GTGFFISPEGWFVTAAHVVMDKKGYL-----RKDLDRAFLIKEQNAKDPKKICQYVSPGP 85
           G+G  + P G  +T  HV+            R++ +   L+++Q                
Sbjct: 108 GSGVIVDPSGLVLTNYHVIEGADEIRIALNDRREYEAEVLLRDQRT-------------- 153

Query: 86  IFPGLDIALLKVDFEKNSDKEWLNKKTEFPFIKVS-TGRLEMGDEVYSFGYPLSSYGIIK 144
                D+A+L++  E          K  FPF+++  +  L +GD V + G P        
Sbjct: 154 -----DLAVLRIKTEA---------KERFPFLELGDSDSLAVGDLVLAIGDPFG------ 193

Query: 145 PGEIGYTKLSPRVTSAIISSNFDTNMGATGPKNYV-LDKALNYGNSGGPII 194
              +G T     VT  I+S+   T +G +  + ++  D A+N GNSGGP++
Sbjct: 194 ---VGQT-----VTQGIVSALARTQVGVSDYQFFIQTDAAINPGNSGGPLV 236