Pairwise Alignments

Query, 258 a.a., serine protease from Methanococcus maripaludis S2

Subject, 503 a.a., PDZ domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 53/183 (28%)

Query: 17  ELPNGKAGGMPTPAGTGFFISPEGWFVTAAHVVMDKKGYLRKDLDRAFLIKEQNAKDPKK 76
           + P+ KA    T  G+GF I   G+ VT  HV+ D      K  D          +DPK 
Sbjct: 96  DAPSRKA----TSLGSGFIIDAAGYIVTNNHVIADADEISVKLHDDTVFQATLVGRDPK- 150

Query: 77  ICQYVSPGPIFPGLDIALLKVDFEKNSDKEWLNKKTEFPFIKVSTGRLE---MGDEVYSF 133
                        +D+ALLK++  K             P + V  G  +   +GD V + 
Sbjct: 151 -------------VDLALLKIEPGKK------------PLVPVPFGNSDDARVGDWVLAI 185

Query: 134 GYPLSSYGIIKPGEIGYTKLSPRVTSAIISSNF-DTNMGATGPKNYVL--DKALNYGNSG 190
           G P    G               VT+ I+S+   D N    GP +  L  D A+N GNSG
Sbjct: 186 GNPFGFGG--------------TVTAGIVSARARDIN---AGPYDDFLQTDAAINRGNSG 228

Query: 191 GPI 193
           GP+
Sbjct: 229 GPM 231