Pairwise Alignments

Query, 258 a.a., serine protease from Methanococcus maripaludis S2

Subject, 523 a.a., serine protease DO-like protease from Agrobacterium fabrum C58

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 42/175 (24%)

Query: 20  NGKAGGMPTPAGTGFFISPEGWFVTAAHVVMDKKGYLRKDLDRAFLIKEQNAKDPKKICQ 79
           +GK    P   G+GFFIS +G+ VT  HVV D   Y     D   L  +   +DP+    
Sbjct: 131 DGKGPLRPVAQGSGFFISEDGYVVTNNHVVDDGSAYTVVMNDGTELEAKLVGRDPR---- 186

Query: 80  YVSPGPIFPGLDIALLKVDFEKNSDKEWLNKKTEFPFIKVSTG-RLEMGDEVYSFGYPLS 138
                      D+ALLKVD         +N+K  F ++K +   ++ +GD V + G P  
Sbjct: 187 ----------TDLALLKVD---------VNRK--FTYVKFADDTKIRVGDWVVAVGNPFG 225

Query: 139 SYGIIKPGEIGYTKLSPRVTSAIISSNFDTNMGATGPKNYV-LDKALNYGNSGGP 192
                         L   VTS IIS+    ++G+    +Y+ +D A+N GNSGGP
Sbjct: 226 --------------LGGTVTSGIISAR-GRDIGSGPYDDYLQIDAAVNRGNSGGP 265