Pairwise Alignments

Query, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 32  LTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSELLDAVSEGEVDC 91
           L V    +  P +Y E  +  GFE+E+   + K++ L  E+    F  LL  + +   D 
Sbjct: 34  LVVATGGEFPPFNYFEGKKLTGFEIEIAEIVVKKMGLAIEWKTIGFDSLLAGLQQDRWDI 93

Query: 92  GIGYIGKTPERQLKMDFSRPYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLE 151
            +   G TPER   +DF+ P+ Y   + +V  D    G   L  K VGV   S     + 
Sbjct: 94  VVSSHGITPERAKAVDFASPH-YCSGSSIVSRDPAIRGAADLTGKVVGVQTGSTYLENVR 152

Query: 152 SLLKSMDFKIIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDIIY 211
            L K  + K   +    D+   L +G++D+ VTD   +L  ++        +GD   +  
Sbjct: 153 KLTKPKEIK--NFPQDRDVRTALATGRVDAWVTDKFVALAAVKSNPQANLKLGDPLFVER 210

Query: 212 VAIAIDNTNPELKKSIDVALLEMENDGTLVKLKEKW 247
           +A A+   N  L  + D AL E   DG+   +  ++
Sbjct: 211 IAAAVGKGNTALAAAYDKALAEALADGSYAAVSNRY 246